Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL54Q6P161 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL54Q6P161 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL54Q6P161 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL54Q6P161 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL54Q6P161 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL54Q6P161 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL54Q6P161 GUSBP5-202ENST00000510805 1989 ntBASIC17.32■□□□□ 0.36
MRPL54Q6P161 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL54Q6P161 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL54Q6P161 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 AC127496.7-201ENST00000625110 1798 ntBASIC17.32■□□□□ 0.36
MRPL54Q6P161 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL54Q6P161 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL54Q6P161 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MRPL54Q6P161 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL54Q6P161 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL54Q6P161 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL54Q6P161 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL54Q6P161 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL54Q6P161 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL54Q6P161 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.31■□□□□ 0.36
MRPL54Q6P161 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MRPL54Q6P161 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.3■□□□□ 0.36
MRPL54Q6P161 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MRPL54Q6P161 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL54Q6P161 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MRPL54Q6P161 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MRPL54Q6P161 AL359504.2-201ENST00000605506 1601 ntBASIC17.29■□□□□ 0.36
MRPL54Q6P161 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 AC097358.2-201ENST00000607541 1159 ntBASIC17.29■□□□□ 0.36
MRPL54Q6P161 MIR6089-201ENST00000616698 64 ntBASIC17.29■□□□□ 0.36
MRPL54Q6P161 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPL54Q6P161 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL54Q6P161 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MRPL54Q6P161 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL54Q6P161 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL54Q6P161 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL54Q6P161 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MRPL54Q6P161 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.27■□□□□ 0.36
MRPL54Q6P161 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.27■□□□□ 0.36
MRPL54Q6P161 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL54Q6P161 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL54Q6P161 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MRPL54Q6P161 HLA-L-211ENST00000482052 1765 ntBASIC17.27■□□□□ 0.35
MRPL54Q6P161 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MRPL54Q6P161 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MRPL54Q6P161 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.27■□□□□ 0.35
MRPL54Q6P161 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.27■□□□□ 0.35
MRPL54Q6P161 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MRPL54Q6P161 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MRPL54Q6P161 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.26■□□□□ 0.35
MRPL54Q6P161 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.26■□□□□ 0.35
MRPL54Q6P161 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MRPL54Q6P161 SLC25A24-204ENST00000569674 2357 ntBASIC17.26■□□□□ 0.35
MRPL54Q6P161 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPL54Q6P161 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms