Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 AC022413.1-201ENST00000624602 984 ntBASIC20.24■□□□□ 0.83
CDK5R1Q15078 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5R1Q15078 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5R1Q15078 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5R1Q15078 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5R1Q15078 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5R1Q15078 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5R1Q15078 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5R1Q15078 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5R1Q15078 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK5R1Q15078 AC233723.2-201ENST00000623798 2106 ntBASIC20.23■□□□□ 0.83
CDK5R1Q15078 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDK5R1Q15078 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK5R1Q15078 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDK5R1Q15078 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5R1Q15078 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5R1Q15078 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5R1Q15078 AC092068.2-201ENST00000590491 1708 ntBASIC20.21■□□□□ 0.83
CDK5R1Q15078 DUSP8P3-201ENST00000399571 1760 ntBASIC20.21■□□□□ 0.83
CDK5R1Q15078 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5R1Q15078 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDK5R1Q15078 CLDN5-201ENST00000403084 2357 ntBASIC20.2■□□□□ 0.82
CDK5R1Q15078 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5R1Q15078 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5R1Q15078 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK5R1Q15078 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5R1Q15078 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5R1Q15078 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5R1Q15078 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDK5R1Q15078 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5R1Q15078 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5R1Q15078 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDK5R1Q15078 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5R1Q15078 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5R1Q15078 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5R1Q15078 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5R1Q15078 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDK5R1Q15078 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5R1Q15078 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDK5R1Q15078 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDK5R1Q15078 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5R1Q15078 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5R1Q15078 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5R1Q15078 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5R1Q15078 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5R1Q15078 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5R1Q15078 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5R1Q15078 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDK5R1Q15078 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5R1Q15078 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5R1Q15078 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDK5R1Q15078 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5R1Q15078 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5R1Q15078 MIR4449-201ENST00000578365 66 ntBASIC20.16■□□□□ 0.82
CDK5R1Q15078 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5R1Q15078 AL161729.1-201ENST00000604104 1402 ntBASIC20.16■□□□□ 0.82
CDK5R1Q15078 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5R1Q15078 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5R1Q15078 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDK5R1Q15078 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.15■□□□□ 0.82
CDK5R1Q15078 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDK5R1Q15078 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5R1Q15078 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.14■□□□□ 0.81
CDK5R1Q15078 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CDK5R1Q15078 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5R1Q15078 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms