Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC41.38■■■■■ 4.21
HMGXB3Q12766 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC41.38■■■■■ 4.21
HMGXB3Q12766 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
HMGXB3Q12766 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC41.37■■■■■ 4.21
HMGXB3Q12766 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC41.36■■■■■ 4.21
HMGXB3Q12766 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC41.36■■■■■ 4.21
HMGXB3Q12766 REST-206ENST00000612429 1376 ntTSL 5 BASIC41.36■■■■■ 4.21
HMGXB3Q12766 REST-207ENST00000616975 1370 ntTSL 5 BASIC41.36■■■■■ 4.21
HMGXB3Q12766 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
HMGXB3Q12766 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
HMGXB3Q12766 AC241377.3-202ENST00000626088 1088 ntBASIC41.35■■■■■ 4.21
HMGXB3Q12766 AC241585.3-202ENST00000628937 1088 ntBASIC41.35■■■■■ 4.21
HMGXB3Q12766 AC245100.8-202ENST00000629247 1058 ntBASIC41.35■■■■■ 4.21
HMGXB3Q12766 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
HMGXB3Q12766 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC41.35■■■■■ 4.21
HMGXB3Q12766 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
HMGXB3Q12766 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC41.35■■■■■ 4.21
HMGXB3Q12766 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
HMGXB3Q12766 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
HMGXB3Q12766 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
HMGXB3Q12766 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC41.34■■■■■ 4.21
HMGXB3Q12766 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
HMGXB3Q12766 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
HMGXB3Q12766 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
HMGXB3Q12766 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
HMGXB3Q12766 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC41.33■■■■■ 4.21
HMGXB3Q12766 SHF-208ENST00000560734 1731 ntTSL 3 BASIC41.32■■■■■ 4.21
HMGXB3Q12766 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC41.32■■■■■ 4.21
HMGXB3Q12766 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC41.32■■■■■ 4.21
HMGXB3Q12766 AC096887.2-201ENST00000623443 1957 ntBASIC41.32■■■■■ 4.2
HMGXB3Q12766 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
HMGXB3Q12766 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC41.31■■■■■ 4.2
HMGXB3Q12766 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC41.31■■■■■ 4.2
HMGXB3Q12766 GRAMD4P2-201ENST00000423297 1097 ntBASIC41.31■■■■■ 4.2
HMGXB3Q12766 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC41.31■■■■■ 4.2
HMGXB3Q12766 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC41.31■■■■■ 4.2
HMGXB3Q12766 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
HMGXB3Q12766 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
HMGXB3Q12766 ME3-201ENST00000323418 1068 ntTSL 5 BASIC41.3■■■■■ 4.2
HMGXB3Q12766 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
HMGXB3Q12766 VPS53-216ENST00000574029 585 ntTSL 4 BASIC41.3■■■■■ 4.2
HMGXB3Q12766 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC41.3■■■■■ 4.2
HMGXB3Q12766 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
HMGXB3Q12766 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC41.3■■■■■ 4.2
HMGXB3Q12766 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC41.3■■■■■ 4.2
HMGXB3Q12766 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
HMGXB3Q12766 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC41.29■■■■■ 4.2
HMGXB3Q12766 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC41.28■■■■■ 4.2
HMGXB3Q12766 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 AC123595.1-201ENST00000440769 1046 ntBASIC41.28■■■■■ 4.2
HMGXB3Q12766 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC41.28■■■■■ 4.2
HMGXB3Q12766 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
HMGXB3Q12766 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
HMGXB3Q12766 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC41.28■■■■■ 4.2
HMGXB3Q12766 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
HMGXB3Q12766 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
HMGXB3Q12766 AC004911.1-201ENST00000416316 871 ntBASIC41.26■■■■■ 4.2
HMGXB3Q12766 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC41.26■■■■■ 4.2
HMGXB3Q12766 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC41.26■■■■■ 4.2
HMGXB3Q12766 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.19
HMGXB3Q12766 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC41.25■■■■■ 4.19
HMGXB3Q12766 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC41.25■■■■■ 4.19
HMGXB3Q12766 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC41.25■■■■■ 4.19
HMGXB3Q12766 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC41.24■■■■■ 4.19
HMGXB3Q12766 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC41.24■■■■■ 4.19
HMGXB3Q12766 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
HMGXB3Q12766 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC41.23■■■■■ 4.19
HMGXB3Q12766 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC41.23■■■■■ 4.19
HMGXB3Q12766 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC41.23■■■■■ 4.19
HMGXB3Q12766 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC41.23■■■■■ 4.19
HMGXB3Q12766 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC41.23■■■■■ 4.19
HMGXB3Q12766 AC097639.1-201ENST00000565519 1891 ntBASIC41.22■■■■■ 4.19
HMGXB3Q12766 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
HMGXB3Q12766 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC41.22■■■■■ 4.19
HMGXB3Q12766 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC41.22■■■■■ 4.19
HMGXB3Q12766 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC41.22■■■■■ 4.19
HMGXB3Q12766 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC41.22■■■■■ 4.19
HMGXB3Q12766 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
HMGXB3Q12766 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
HMGXB3Q12766 MIR3181-201ENST00000578512 73 ntBASIC41.2■■■■■ 4.19
HMGXB3Q12766 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
HMGXB3Q12766 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
HMGXB3Q12766 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC41.19■■■■■ 4.18
HMGXB3Q12766 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC41.19■■■■■ 4.18
HMGXB3Q12766 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC41.18■■■■■ 4.18
HMGXB3Q12766 AC012414.1-201ENST00000556676 535 ntBASIC41.18■■■■■ 4.18
HMGXB3Q12766 AC009086.3-201ENST00000623486 1008 ntBASIC41.18■■■■■ 4.18
HMGXB3Q12766 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC41.18■■■■■ 4.18
HMGXB3Q12766 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC41.18■■■■■ 4.18
HMGXB3Q12766 AL358852.1-201ENST00000623174 1268 ntBASIC41.18■■■■■ 4.18
HMGXB3Q12766 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC41.18■■■■■ 4.18
HMGXB3Q12766 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC41.18■■■■■ 4.18
HMGXB3Q12766 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC41.17■■■■■ 4.18
HMGXB3Q12766 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC41.17■■■■■ 4.18
HMGXB3Q12766 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms