Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 SED4YCR067C 3198 nt4.24□□□□□ -1.73
HRD1Q08109 TIM54YJL054W 1437 nt4.24□□□□□ -1.73
HRD1Q08109 IPI1YHR085W 1005 nt4.24□□□□□ -1.73
HRD1Q08109 ERP5YHR110W 639 nt4.24□□□□□ -1.73
HRD1Q08109 YHR127WYHR127W 732 nt4.24□□□□□ -1.73
HRD1Q08109 YJL068CYJL068C 900 nt4.24□□□□□ -1.73
HRD1Q08109 YKL151CYKL151C 1014 nt4.24□□□□□ -1.73
HRD1Q08109 YLR118CYLR118C 684 nt4.24□□□□□ -1.73
HRD1Q08109 YPL113CYPL113C 1191 nt4.24□□□□□ -1.73
HRD1Q08109 ALG2YGL065C 1512 nt4.24□□□□□ -1.73
HRD1Q08109 APE1YKL103C 1545 nt4.24□□□□□ -1.73
HRD1Q08109 MCH4YOL119C 1506 nt4.24□□□□□ -1.73
HRD1Q08109 RSC30YHR056C 2652 nt4.23□□□□□ -1.73
HRD1Q08109 MMP1YLL061W 1752 nt4.23□□□□□ -1.73
HRD1Q08109 HIR2YOR038C 2628 nt4.23□□□□□ -1.73
HRD1Q08109 YGR122WYGR122W 1209 nt4.23□□□□□ -1.73
HRD1Q08109 SYF2YGR129W 648 nt4.23□□□□□ -1.73
HRD1Q08109 MTC2YKL098W 1074 nt4.23□□□□□ -1.73
HRD1Q08109 snR10snR10 245 nt4.23□□□□□ -1.73
HRD1Q08109 MRI1YPR118W 1236 nt4.23□□□□□ -1.73
HRD1Q08109 TIF4632YGL049C 2745 nt4.23□□□□□ -1.73
HRD1Q08109 YMR196WYMR196W 3267 nt4.23□□□□□ -1.73
HRD1Q08109 HFA1YMR207C 6372 nt4.23□□□□□ -1.73
HRD1Q08109 PRR1YKL116C 1557 nt4.23□□□□□ -1.73
HRD1Q08109 MSS116YDR194C 1995 nt4.22□□□□□ -1.73
HRD1Q08109 SLO1YER180C-A 258 nt4.22□□□□□ -1.73
HRD1Q08109 NIT2YJL126W 924 nt4.22□□□□□ -1.73
HRD1Q08109 MRP21YBL090W 534 nt4.22□□□□□ -1.73
HRD1Q08109 ETT1YOR051C 1239 nt4.22□□□□□ -1.73
HRD1Q08109 MDM34YGL219C 1380 nt4.22□□□□□ -1.73
HRD1Q08109 THP1YOL072W 1368 nt4.22□□□□□ -1.73
HRD1Q08109 YLH47YPR125W 1365 nt4.22□□□□□ -1.73
HRD1Q08109 TFG1YGR186W 2208 nt4.22□□□□□ -1.73
HRD1Q08109 PRP28YDR243C 1767 nt4.22□□□□□ -1.73
HRD1Q08109 BRE2YLR015W 1518 nt4.21□□□□□ -1.73
HRD1Q08109 TPO2YGR138C 1845 nt4.21□□□□□ -1.74
HRD1Q08109 FUI1YBL042C 1920 nt4.21□□□□□ -1.74
HRD1Q08109 GIP1YBR045C 1920 nt4.21□□□□□ -1.74
HRD1Q08109 LEU1YGL009C 2340 nt4.21□□□□□ -1.74
HRD1Q08109 YDL172CYDL172C 480 nt4.21□□□□□ -1.74
HRD1Q08109 RPL28YGL103W 450 nt4.21□□□□□ -1.74
HRD1Q08109 EFM4YIL064W 774 nt4.21□□□□□ -1.74
HRD1Q08109 KTI12YKL110C 942 nt4.21□□□□□ -1.74
HRD1Q08109 SFT2YBL102W 648 nt4.21□□□□□ -1.74
HRD1Q08109 OST3YOR085W 1053 nt4.21□□□□□ -1.74
HRD1Q08109 YCL021W-AYCL021W-A 378 nt4.21□□□□□ -1.74
HRD1Q08109 PEX29YDR479C 1665 nt4.2□□□□□ -1.74
HRD1Q08109 ADY2YCR010C 852 nt4.2□□□□□ -1.74
HRD1Q08109 CAB4YGR277C 918 nt4.2□□□□□ -1.74
HRD1Q08109 FUN19YAL034C 1242 nt4.2□□□□□ -1.74
HRD1Q08109 ARG1YOL058W 1263 nt4.2□□□□□ -1.74
HRD1Q08109 ETR1YBR026C 1143 nt4.2□□□□□ -1.74
HRD1Q08109 ADE3YGR204W 2841 nt4.2□□□□□ -1.74
HRD1Q08109 STE7YDL159W 1548 nt4.2□□□□□ -1.74
HRD1Q08109 FAA4YMR246W 2085 nt4.2□□□□□ -1.74
HRD1Q08109 UBX7YBR273C 1311 nt4.2□□□□□ -1.74
HRD1Q08109 ROT2YBR229C 2865 nt4.2□□□□□ -1.74
HRD1Q08109 APJ1YNL077W 1587 nt4.19□□□□□ -1.74
HRD1Q08109 MSH1YHR120W 2880 nt4.19□□□□□ -1.74
HRD1Q08109 PRO3YER023W 861 nt4.19□□□□□ -1.74
HRD1Q08109 TEF4YKL081W 1239 nt4.19□□□□□ -1.74
HRD1Q08109 MRL1YPR079W 1146 nt4.19□□□□□ -1.74
HRD1Q08109 QCR2YPR191W 1107 nt4.19□□□□□ -1.74
HRD1Q08109 RIM21YNL294C 1602 nt4.19□□□□□ -1.74
HRD1Q08109 YPL260WYPL260W 1656 nt4.19□□□□□ -1.74
HRD1Q08109 RSC6YCR052W 1452 nt4.18□□□□□ -1.74
HRD1Q08109 ADE4YMR300C 1533 nt4.18□□□□□ -1.74
HRD1Q08109 TRX2YGR209C 315 nt4.18□□□□□ -1.74
HRD1Q08109 RPL3YOR063W 1164 nt4.18□□□□□ -1.74
HRD1Q08109 STR2YJR130C 1920 nt4.18□□□□□ -1.74
HRD1Q08109 TGL4YKR089C 2733 nt4.18□□□□□ -1.74
HRD1Q08109 LYS2YBR115C 4179 nt4.18□□□□□ -1.74
HRD1Q08109 ASA1YPR085C 1332 nt4.18□□□□□ -1.74
HRD1Q08109 RFT1YBL020W 1725 nt4.18□□□□□ -1.74
HRD1Q08109 PRO2YOR323C 1371 nt4.17□□□□□ -1.74
HRD1Q08109 RHB1YCR027C 630 nt4.17□□□□□ -1.74
HRD1Q08109 RSM10YDR041W 612 nt4.17□□□□□ -1.74
HRD1Q08109 HST4YDR191W 1113 nt4.17□□□□□ -1.74
HRD1Q08109 SUA5YGL169W 1281 nt4.17□□□□□ -1.74
HRD1Q08109 MRPL13YKR006C 795 nt4.17□□□□□ -1.74
HRD1Q08109 YOR318CYOR318C 306 nt4.17□□□□□ -1.74
HRD1Q08109 MET31YPL038W 534 nt4.17□□□□□ -1.74
HRD1Q08109 PAN1YIR006C 4443 nt4.17□□□□□ -1.74
HRD1Q08109 SSB1YDL229W 1842 nt4.16□□□□□ -1.74
HRD1Q08109 SSB2YNL209W 1842 nt4.16□□□□□ -1.74
HRD1Q08109 THI21YPL258C 1656 nt4.16□□□□□ -1.74
HRD1Q08109 CDC15YAR019C 2925 nt4.16□□□□□ -1.74
HRD1Q08109 URA7YBL039C 1740 nt4.16□□□□□ -1.74
HRD1Q08109 BUD22YMR014W 1560 nt4.16□□□□□ -1.74
HRD1Q08109 ARP2YDL029W 1176 nt4.16□□□□□ -1.74
HRD1Q08109 SLC1YDL052C 912 nt4.16□□□□□ -1.74
HRD1Q08109 GET3YDL100C 1065 nt4.16□□□□□ -1.74
HRD1Q08109 SKI6YGR195W 741 nt4.16□□□□□ -1.74
HRD1Q08109 YMR245WYMR245W 621 nt4.16□□□□□ -1.74
HRD1Q08109 YOR200WYOR200W 399 nt4.16□□□□□ -1.74
HRD1Q08109 NAT5YOR253W 531 nt4.16□□□□□ -1.74
HRD1Q08109 MNN1YER001W 2289 nt4.16□□□□□ -1.74
HRD1Q08109 YJL206CYJL206C 2277 nt4.16□□□□□ -1.74
HRD1Q08109 ATG1YGL180W 2694 nt4.15□□□□□ -1.74
HRD1Q08109 LHP1YDL051W 828 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms