Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC11.49□□□□□ -0.577e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.617e-9■■■■□ 21.4
SRSF1Q07955 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.631e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC11.04□□□□□ -0.647e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC11.01□□□□□ -0.657e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC10.89□□□□□ -0.677e-9■■■■□ 21.4
SRSF1Q07955 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.681e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-224ENST00000454335 631 ntTSL 410.62□□□□□ -0.717e-9■■■■□ 21.4
SRSF1Q07955 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC10.59□□□□□ -0.711e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-204ENST00000412850 543 ntTSL 410.3□□□□□ -0.767e-9■■■■□ 21.4
SRSF1Q07955 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.771e-6■■■■□ 21.4
SRSF1Q07955 PAN2-210ENST00000548982 408 ntTSL 310.15□□□□□ -0.781e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-217ENST00000443853 579 ntTSL 310.04□□□□□ -0.87e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-215ENST00000437427 576 ntTSL 410.04□□□□□ -0.87e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-216ENST00000440424 537 ntTSL 49.94□□□□□ -0.827e-9■■■■□ 21.4
SRSF1Q07955 PAN2-219ENST00000552868 469 ntTSL 39.81□□□□□ -0.841e-6■■■■□ 21.4
SRSF1Q07955 VPS13D-210ENST00000489961 443 ntTSL 59.75□□□□□ -0.851e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC9.67□□□□□ -0.867e-9■■■■□ 21.4
SRSF1Q07955 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.931e-6■■■■□ 21.4
SRSF1Q07955 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.951e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-226ENST00000476645 464 ntTSL 48.99□□□□□ -0.974e-10■■■■□ 21.4
SRSF1Q07955 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC8.9□□□□□ -0.981e-6■■■■□ 21.4
SRSF1Q07955 PAN2-208ENST00000547994 2605 ntTSL 1 (best)8.79□□□□□ -11e-6■■■■□ 21.4
SRSF1Q07955 ZFAND5-201ENST00000237937 5310 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.011e-6■■■■□ 21.4
SRSF1Q07955 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC8.46□□□□□ -1.051e-6■■■■□ 21.4
SRSF1Q07955 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.191e-6■■■■□ 21.4
SRSF1Q07955 STK4-205ENST00000487587 1850 ntTSL 27.3□□□□□ -1.241e-6■■■■□ 21.4
SRSF1Q07955 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC7.27□□□□□ -1.251e-6■■■■□ 21.4
SRSF1Q07955 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.251e-6■■■■□ 21.4
SRSF1Q07955 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.281e-6■■■■□ 21.4
SRSF1Q07955 CHD2-211ENST00000627460 760 ntTSL 57.01□□□□□ -1.291e-6■■■■□ 21.4
SRSF1Q07955 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.31e-6■■■■□ 21.4
SRSF1Q07955 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC6.59□□□□□ -1.351e-6■■■■□ 21.4
SRSF1Q07955 GON4L-209ENST00000471341 5097 ntTSL 26.39□□□□□ -1.391e-6■■■■□ 21.4
SRSF1Q07955 CREB1-216ENST00000494094 580 ntTSL 26.31□□□□□ -1.41e-6■■■■□ 21.4
SRSF1Q07955 CREB1-211ENST00000452474 518 ntTSL 46.31□□□□□ -1.41e-6■■■■□ 21.4
SRSF1Q07955 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.431e-6■■■■□ 21.4
SRSF1Q07955 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.431e-6■■■■□ 21.4
SRSF1Q07955 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.441e-6■■■■□ 21.4
SRSF1Q07955 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.88□□□□□ -1.471e-6■■■■□ 21.4
SRSF1Q07955 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.481e-6■■■■□ 21.4
SRSF1Q07955 CPSF6-206ENST00000550987 560 ntTSL 45.52□□□□□ -1.531e-6■■■■□ 21.4
SRSF1Q07955 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.721e-6■■■■□ 21.4
SRSF1Q07955 CREB1-207ENST00000445803 651 ntTSL 42.9□□□□□ -1.951e-6■■■■□ 21.4
SRSF1Q07955 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.45□□□□□ -2.021e-6■■■■□ 21.4
SRSF1Q07955 GOLGA8A-205ENST00000569781 653 ntTSL 525.78■■□□□ 1.722e-8■■■■□ 21.4
SRSF1Q07955 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.782e-6■■■■□ 21.4
SRSF1Q07955 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.822e-6■■■■□ 21.4
SRSF1Q07955 POLE-210ENST00000537064 8011 ntTSL 1 (best)8.86□□□□□ -0.992e-6■■■■□ 21.4
SRSF1Q07955 ARHGEF1-207ENST00000594258 919 ntTSL 318.61■□□□□ 0.571e-6■■■■□ 21.3
SRSF1Q07955 ARHGEF1-213ENST00000595897 2973 ntTSL 1 (best)13.38□□□□□ -0.271e-6■■■■□ 21.3
SRSF1Q07955 CHD2-205ENST00000625662 5127 ntTSL 59.36□□□□□ -0.914e-6■■■■□ 21.3
SRSF1Q07955 GNAS-244ENST00000485673 715 ntTSL 525.64■■□□□ 1.71e-7■■■■□ 21.3
SRSF1Q07955 GNAS-243ENST00000484504 662 ntTSL 225.64■■□□□ 1.71e-7■■■■□ 21.3
SRSF1Q07955 GNAS-228ENST00000469431 702 ntTSL 524.94■■□□□ 1.581e-7■■■■□ 21.3
SRSF1Q07955 GNAS-257ENST00000604005 693 ntTSL 324.94■■□□□ 1.581e-7■■■■□ 21.3
SRSF1Q07955 GNAS-235ENST00000478585 543 ntTSL 224.94■■□□□ 1.581e-7■■■■□ 21.3
SRSF1Q07955 GNAS-224ENST00000464960 986 ntTSL 224.55■■□□□ 1.521e-7■■■■□ 21.3
SRSF1Q07955 GNAS-229ENST00000470512 913 ntTSL 523.9■■□□□ 1.421e-7■■■■□ 21.3
SRSF1Q07955 GNAS-237ENST00000480232 893 ntTSL 523.47■■□□□ 1.351e-7■■■■□ 21.3
SRSF1Q07955 ACD-210ENST00000602821 544 ntTSL 421.3■■□□□ 18e-7■■■■□ 21.3
SRSF1Q07955 GNAS-234ENST00000477931 1663 ntTSL 1 (best)21.12■□□□□ 0.971e-7■■■■□ 21.3
SRSF1Q07955 ACD-213ENST00000602945 805 ntTSL 519.47■□□□□ 0.718e-7■■■■□ 21.3
SRSF1Q07955 YWHAQ-203ENST00000446619 665 ntTSL 319.38■□□□□ 0.698e-7■■■■□ 21.3
SRSF1Q07955 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.17■□□□□ 0.58e-7■■■■□ 21.3
SRSF1Q07955 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.488e-7■■■■□ 21.3
SRSF1Q07955 ACD-205ENST00000602423 386 ntTSL 317.91■□□□□ 0.468e-7■■■■□ 21.3
SRSF1Q07955 GNAS-226ENST00000467321 733 ntTSL 517.9■□□□□ 0.461e-7■■■■□ 21.3
SRSF1Q07955 DPP9-221ENST00000601130 600 ntTSL 417.48■□□□□ 0.398e-7■■■■□ 21.3
SRSF1Q07955 GNAS-250ENST00000491348 1068 ntTSL 317.4■□□□□ 0.381e-7■■■■□ 21.3
SRSF1Q07955 GNAS-230ENST00000472183 911 ntTSL 317.4■□□□□ 0.381e-7■■■■□ 21.3
SRSF1Q07955 ACD-209ENST00000602780 579 ntTSL 217.34■□□□□ 0.378e-7■■■■□ 21.3
SRSF1Q07955 DPP9-209ENST00000597726 570 ntTSL 417.33■□□□□ 0.368e-7■■■■□ 21.3
SRSF1Q07955 GNAS-238ENST00000480975 1534 ntTSL 517.32■□□□□ 0.361e-7■■■■□ 21.3
SRSF1Q07955 ACD-211ENST00000602850 883 ntTSL 516.96■□□□□ 0.318e-7■■■■□ 21.3
SRSF1Q07955 DPP9-225ENST00000602161 566 ntTSL 416.94■□□□□ 0.38e-7■■■■□ 21.3
SRSF1Q07955 DPP9-206ENST00000597024 501 ntTSL 216.79■□□□□ 0.288e-7■■■■□ 21.3
SRSF1Q07955 DPP9-219ENST00000600556 742 ntTSL 316.49■□□□□ 0.238e-7■■■■□ 21.3
SRSF1Q07955 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.218e-7■■■■□ 21.3
SRSF1Q07955 LIG1-205ENST00000593425 575 ntTSL 416.18■□□□□ 0.188e-7■■■■□ 21.3
SRSF1Q07955 ACD-206ENST00000602519 997 ntTSL 215.84■□□□□ 0.138e-7■■■■□ 21.3
SRSF1Q07955 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.088e-7■■■■□ 21.3
SRSF1Q07955 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.058e-7■■■■□ 21.3
SRSF1Q07955 DPP9-218ENST00000600497 626 ntTSL 315.21■□□□□ 0.038e-7■■■■□ 21.3
SRSF1Q07955 DPP9-205ENST00000595940 552 ntTSL 415.09■□□□□ 0.018e-7■■■■□ 21.3
SRSF1Q07955 RAD54L-204ENST00000463715 718 ntTSL 514.94□□□□□ -0.028e-7■■■■□ 21.3
SRSF1Q07955 GNAS-240ENST00000481768 1903 ntTSL 1 (best)14.92□□□□□ -0.021e-7■■■■□ 21.3
SRSF1Q07955 FUS-207ENST00000487974 643 ntTSL 214.91□□□□□ -0.028e-7■■■■□ 21.3
SRSF1Q07955 DPP9-224ENST00000601764 1909 ntTSL 514.85□□□□□ -0.038e-7■■■■□ 21.3
SRSF1Q07955 ACLY-208ENST00000590735 586 ntTSL 414.61□□□□□ -0.073e-9■■■■□ 21.3
SRSF1Q07955 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.088e-7■■■■□ 21.3
SRSF1Q07955 GNAS-221ENST00000462499 492 ntTSL 214.53□□□□□ -0.081e-7■■■■□ 21.3
SRSF1Q07955 GNAS-241ENST00000482112 704 ntTSL 314.53□□□□□ -0.081e-7■■■■□ 21.3
SRSF1Q07955 RAD54L-212ENST00000493985 810 ntTSL 414.4□□□□□ -0.18e-7■■■■□ 21.3
SRSF1Q07955 ACD-212ENST00000602860 1858 ntTSL 514.39□□□□□ -0.118e-7■■■■□ 21.3
SRSF1Q07955 GNAS-223ENST00000464788 583 ntTSL 214.11□□□□□ -0.151e-7■■■■□ 21.3
SRSF1Q07955 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.81□□□□□ -0.21e-7■■■■□ 21.3
SRSF1Q07955 DPP9-220ENST00000600621 625 ntTSL 413.79□□□□□ -0.28e-7■■■■□ 21.3
SRSF1Q07955 DPP9-212ENST00000598041 542 ntTSL 413.79□□□□□ -0.28e-7■■■■□ 21.3
SRSF1Q07955 RAD54L-206ENST00000472889 767 ntTSL 413.36□□□□□ -0.278e-7■■■■□ 21.3
Retrieved 100 of 14,836 protein–RNA pairs in 156.4 ms