Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
GABREP78334 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GABREP78334 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GABREP78334 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GABREP78334 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.95■■□□□ 1.1
GABREP78334 AC008764.7-201ENST00000593779 1081 ntBASIC21.95■■□□□ 1.1
GABREP78334 AC099791.2-201ENST00000605725 427 ntBASIC21.95■■□□□ 1.1
GABREP78334 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GABREP78334 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.95■■□□□ 1.1
GABREP78334 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GABREP78334 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GABREP78334 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
GABREP78334 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
GABREP78334 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.94■■□□□ 1.1
GABREP78334 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GABREP78334 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.94■■□□□ 1.1
GABREP78334 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GABREP78334 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.94■■□□□ 1.1
GABREP78334 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.94■■□□□ 1.1
GABREP78334 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
GABREP78334 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GABREP78334 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.94■■□□□ 1.1
GABREP78334 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GABREP78334 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GABREP78334 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GABREP78334 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.94■■□□□ 1.1
GABREP78334 IRS3P-201ENST00000223076 1006 ntBASIC21.93■■□□□ 1.1
GABREP78334 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GABREP78334 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GABREP78334 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.93■■□□□ 1.1
GABREP78334 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GABREP78334 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GABREP78334 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GABREP78334 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GABREP78334 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GABREP78334 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.92■■□□□ 1.1
GABREP78334 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.92■■□□□ 1.1
GABREP78334 AC011298.3-201ENST00000615796 283 ntBASIC21.92■■□□□ 1.1
GABREP78334 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.92■■□□□ 1.1
GABREP78334 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.92■■□□□ 1.1
GABREP78334 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
GABREP78334 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 ERN1-208ENST00000606895 2068 ntBASIC21.91■■□□□ 1.1
GABREP78334 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 AC099791.1-201ENST00000416440 715 ntBASIC21.91■■□□□ 1.1
GABREP78334 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
GABREP78334 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 AL138724.1-201ENST00000606771 1088 ntBASIC21.91■■□□□ 1.1
GABREP78334 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GABREP78334 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
GABREP78334 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GABREP78334 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GABREP78334 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GABREP78334 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
GABREP78334 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GABREP78334 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GABREP78334 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.9■■□□□ 1.1
GABREP78334 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GABREP78334 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
GABREP78334 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.89■■□□□ 1.1
GABREP78334 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
GABREP78334 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GABREP78334 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.89■■□□□ 1.09
GABREP78334 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.89■■□□□ 1.09
GABREP78334 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.89■■□□□ 1.09
GABREP78334 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.89■■□□□ 1.09
GABREP78334 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.89■■□□□ 1.09
GABREP78334 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GABREP78334 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GABREP78334 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.88■■□□□ 1.09
GABREP78334 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GABREP78334 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.88■■□□□ 1.09
GABREP78334 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.88■■□□□ 1.09
GABREP78334 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
GABREP78334 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
GABREP78334 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.87■■□□□ 1.09
GABREP78334 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
GABREP78334 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.87■■□□□ 1.09
GABREP78334 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.87■■□□□ 1.09
GABREP78334 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.87■■□□□ 1.09
GABREP78334 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
GABREP78334 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.87■■□□□ 1.09
GABREP78334 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GABREP78334 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.86■■□□□ 1.09
GABREP78334 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms