Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42P60953 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42P60953 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CDC42P60953 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42P60953 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42P60953 KRT18P10-201ENST00000388836 1287 ntBASIC20.95■□□□□ 0.94
CDC42P60953 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CDC42P60953 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42P60953 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42P60953 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.95■□□□□ 0.94
CDC42P60953 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42P60953 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CDC42P60953 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42P60953 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDC42P60953 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDC42P60953 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42P60953 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42P60953 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42P60953 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.94■□□□□ 0.94
CDC42P60953 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
CDC42P60953 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42P60953 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42P60953 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42P60953 ANOS2P-203ENST00000472227 1816 ntBASIC20.93■□□□□ 0.94
CDC42P60953 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42P60953 AC060814.1-201ENST00000554326 538 ntBASIC20.93■□□□□ 0.94
CDC42P60953 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42P60953 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CDC42P60953 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42P60953 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42P60953 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42P60953 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42P60953 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42P60953 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42P60953 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDC42P60953 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CDC42P60953 MIR3648-2-201ENST00000581792 180 ntBASIC20.92■□□□□ 0.94
CDC42P60953 MIR3648-1-201ENST00000615959 180 ntBASIC20.92■□□□□ 0.94
CDC42P60953 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.92■□□□□ 0.94
CDC42P60953 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42P60953 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42P60953 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42P60953 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 RP9P-202ENST00000450133 1212 ntBASIC20.91■□□□□ 0.94
CDC42P60953 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42P60953 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CDC42P60953 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.9■□□□□ 0.94
CDC42P60953 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDC42P60953 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.9■□□□□ 0.94
CDC42P60953 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDC42P60953 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42P60953 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42P60953 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42P60953 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42P60953 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42P60953 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42P60953 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42P60953 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42P60953 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42P60953 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42P60953 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42P60953 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42P60953 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42P60953 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42P60953 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42P60953 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDC42P60953 AC092068.2-201ENST00000590491 1708 ntBASIC20.88■□□□□ 0.93
CDC42P60953 ABHD17AP4-201ENST00000411545 909 ntBASIC20.88■□□□□ 0.93
CDC42P60953 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42P60953 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42P60953 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42P60953 EP400NL-214ENST00000641289 2402 ntBASIC20.88■□□□□ 0.93
CDC42P60953 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42P60953 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42P60953 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC42P60953 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDC42P60953 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42P60953 DUSP8P3-201ENST00000399571 1760 ntBASIC20.87■□□□□ 0.93
CDC42P60953 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42P60953 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42P60953 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms