Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLF3P57682 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KLF3P57682 AC131274.2-201ENST00000580697 1507 ntBASIC19.73■□□□□ 0.75
KLF3P57682 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLF3P57682 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLF3P57682 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
KLF3P57682 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLF3P57682 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.73■□□□□ 0.75
KLF3P57682 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KLF3P57682 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLF3P57682 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
KLF3P57682 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.73■□□□□ 0.75
KLF3P57682 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLF3P57682 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLF3P57682 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLF3P57682 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.72■□□□□ 0.75
KLF3P57682 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KLF3P57682 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.72■□□□□ 0.75
KLF3P57682 AL161729.1-201ENST00000604104 1402 ntBASIC19.72■□□□□ 0.75
KLF3P57682 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLF3P57682 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KLF3P57682 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLF3P57682 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLF3P57682 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
KLF3P57682 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
KLF3P57682 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.71■□□□□ 0.75
KLF3P57682 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.71■□□□□ 0.75
KLF3P57682 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.71■□□□□ 0.75
KLF3P57682 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.71■□□□□ 0.75
KLF3P57682 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.71■□□□□ 0.75
KLF3P57682 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLF3P57682 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLF3P57682 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KLF3P57682 MIR6722-201ENST00000617286 78 ntBASIC19.7■□□□□ 0.74
KLF3P57682 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
KLF3P57682 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLF3P57682 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLF3P57682 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLF3P57682 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLF3P57682 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLF3P57682 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.69■□□□□ 0.74
KLF3P57682 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KLF3P57682 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
KLF3P57682 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.68■□□□□ 0.74
KLF3P57682 AC131212.1-201ENST00000613771 668 ntBASIC19.68■□□□□ 0.74
KLF3P57682 MIR6724-1-201ENST00000616420 92 ntBASIC19.68■□□□□ 0.74
KLF3P57682 MIR6724-2-201ENST00000616483 92 ntBASIC19.68■□□□□ 0.74
KLF3P57682 MIR6724-4-201ENST00000617390 92 ntBASIC19.68■□□□□ 0.74
KLF3P57682 MIR6724-3-201ENST00000622482 92 ntBASIC19.68■□□□□ 0.74
KLF3P57682 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLF3P57682 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLF3P57682 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KLF3P57682 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KLF3P57682 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLF3P57682 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.67■□□□□ 0.74
KLF3P57682 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.67■□□□□ 0.74
KLF3P57682 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KLF3P57682 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KLF3P57682 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
KLF3P57682 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLF3P57682 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.67■□□□□ 0.74
KLF3P57682 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
KLF3P57682 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
KLF3P57682 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KLF3P57682 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.66■□□□□ 0.74
KLF3P57682 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.66■□□□□ 0.74
KLF3P57682 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.66■□□□□ 0.74
KLF3P57682 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KLF3P57682 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLF3P57682 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.66■□□□□ 0.74
KLF3P57682 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.65■□□□□ 0.74
KLF3P57682 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.65■□□□□ 0.74
KLF3P57682 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KLF3P57682 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.65■□□□□ 0.74
KLF3P57682 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.65■□□□□ 0.74
KLF3P57682 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.65■□□□□ 0.74
KLF3P57682 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.65■□□□□ 0.74
KLF3P57682 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLF3P57682 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms