Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 TUP1YCR084C 2142 nt5.33□□□□□ -1.56
UPF3P48412 BUD14YAR014C 2130 nt5.33□□□□□ -1.56
UPF3P48412 ACS2YLR153C 2052 nt5.33□□□□□ -1.56
UPF3P48412 YEL077CYEL077C 3834 nt5.33□□□□□ -1.56
UPF3P48412 RPT6YGL048C 1218 nt5.33□□□□□ -1.56
UPF3P48412 PAN6YIL145C 930 nt5.33□□□□□ -1.56
UPF3P48412 YJL193WYJL193W 1209 nt5.33□□□□□ -1.56
UPF3P48412 PRM9YAR031W 897 nt5.33□□□□□ -1.56
UPF3P48412 YBL044WYBL044W 369 nt5.33□□□□□ -1.56
UPF3P48412 KCC4YCL024W 3114 nt5.33□□□□□ -1.56
UPF3P48412 ACF2YLR144C 2340 nt5.32□□□□□ -1.56
UPF3P48412 LDB17YDL146W 1476 nt5.32□□□□□ -1.56
UPF3P48412 ESF1YDR365C 1887 nt5.32□□□□□ -1.56
UPF3P48412 CDC43YGL155W 1131 nt5.32□□□□□ -1.56
UPF3P48412 EGD2YHR193C 525 nt5.32□□□□□ -1.56
UPF3P48412 YLR036CYLR036C 612 nt5.32□□□□□ -1.56
UPF3P48412 SSP120YLR250W 705 nt5.32□□□□□ -1.56
UPF3P48412 TAF4YMR005W 1167 nt5.32□□□□□ -1.56
UPF3P48412 NRM1YNR009W 750 nt5.32□□□□□ -1.56
UPF3P48412 YOR200WYOR200W 399 nt5.32□□□□□ -1.56
UPF3P48412 YBR056C-BYBR056C-B 159 nt5.32□□□□□ -1.56
UPF3P48412 PDH1YPR002W 1551 nt5.32□□□□□ -1.56
UPF3P48412 YBR139WYBR139W 1527 nt5.32□□□□□ -1.56
UPF3P48412 MPH2YDL247W 1830 nt5.32□□□□□ -1.56
UPF3P48412 SHM1YBR263W 1473 nt5.32□□□□□ -1.56
UPF3P48412 SAS4YDR181C 1446 nt5.31□□□□□ -1.56
UPF3P48412 RFT1YBL020W 1725 nt5.31□□□□□ -1.56
UPF3P48412 YFL034WYFL034W 3222 nt5.31□□□□□ -1.56
UPF3P48412 TEF1YPR080W 1377 nt5.31□□□□□ -1.56
UPF3P48412 TEF2YBR118W 1377 nt5.31□□□□□ -1.56
UPF3P48412 PCL9YDL179W 915 nt5.31□□□□□ -1.56
UPF3P48412 GLO2YDR272W 825 nt5.31□□□□□ -1.56
UPF3P48412 CBP4YGR174C 513 nt5.31□□□□□ -1.56
UPF3P48412 VTA1YLR181C 993 nt5.31□□□□□ -1.56
UPF3P48412 LST8YNL006W 912 nt5.31□□□□□ -1.56
UPF3P48412 ARR3YPR201W 1215 nt5.31□□□□□ -1.56
UPF3P48412 GDB1YPR184W 4611 nt5.31□□□□□ -1.56
UPF3P48412 HFI1YPL254W 1467 nt5.31□□□□□ -1.56
UPF3P48412 PWP1YLR196W 1731 nt5.31□□□□□ -1.56
UPF3P48412 TSL1YML100W 3297 nt5.31□□□□□ -1.56
UPF3P48412 EKI1YDR147W 1605 nt5.3□□□□□ -1.56
UPF3P48412 YDL119CYDL119C 924 nt5.3□□□□□ -1.56
UPF3P48412 YDR053WYDR053W 396 nt5.3□□□□□ -1.56
UPF3P48412 DBR1YKL149C 1218 nt5.3□□□□□ -1.56
UPF3P48412 PSR1YLL010C 1284 nt5.3□□□□□ -1.56
UPF3P48412 PGA3YML125C 939 nt5.3□□□□□ -1.56
UPF3P48412 YNL095CYNL095C 1929 nt5.3□□□□□ -1.56
UPF3P48412 RRN3YKL125W 1884 nt5.3□□□□□ -1.56
UPF3P48412 HPF1YOL155C 2904 nt5.3□□□□□ -1.56
UPF3P48412 ATH1YPR026W 3636 nt5.29□□□□□ -1.56
UPF3P48412 HXT4YHR092C 1731 nt5.29□□□□□ -1.56
UPF3P48412 MTQ2YDR140W 666 nt5.29□□□□□ -1.56
UPF3P48412 PHM8YER037W 966 nt5.29□□□□□ -1.56
UPF3P48412 DSD1YGL196W 1287 nt5.29□□□□□ -1.56
UPF3P48412 PCT1YGR202C 1275 nt5.29□□□□□ -1.56
UPF3P48412 RPS31YLR167W 459 nt5.29□□□□□ -1.56
UPF3P48412 MRPL22YNL177C 930 nt5.29□□□□□ -1.56
UPF3P48412 ANT1YPR128C 987 nt5.29□□□□□ -1.56
UPF3P48412 KRS1YDR037W 1776 nt5.29□□□□□ -1.56
UPF3P48412 RIM15YFL033C 5313 nt5.29□□□□□ -1.56
UPF3P48412 ARG4YHR018C 1392 nt5.29□□□□□ -1.56
UPF3P48412 AIM10YER087W 1731 nt5.28□□□□□ -1.56
UPF3P48412 YDR444WYDR444W 2064 nt5.28□□□□□ -1.56
UPF3P48412 RPT4YOR259C 1314 nt5.28□□□□□ -1.56
UPF3P48412 YGL118CYGL118C 438 nt5.28□□□□□ -1.56
UPF3P48412 MHO1YJR008W 1017 nt5.28□□□□□ -1.56
UPF3P48412 MRT4YKL009W 711 nt5.28□□□□□ -1.56
UPF3P48412 MFA2YNL145W 117 nt5.28□□□□□ -1.56
UPF3P48412 AIM41YOR215C 558 nt5.28□□□□□ -1.56
UPF3P48412 ECM32YER176W 3366 nt5.27□□□□□ -1.57
UPF3P48412 ERG4YGL012W 1422 nt5.27□□□□□ -1.57
UPF3P48412 SHE10YGL228W 1734 nt5.27□□□□□ -1.57
UPF3P48412 SYF2YGR129W 648 nt5.27□□□□□ -1.57
UPF3P48412 YGR273CYGR273C 525 nt5.27□□□□□ -1.57
UPF3P48412 YNG1YOR064C 660 nt5.27□□□□□ -1.57
UPF3P48412 NAT3YPR131C 588 nt5.27□□□□□ -1.57
UPF3P48412 HST1YOL068C 1512 nt5.27□□□□□ -1.57
UPF3P48412 CYK3YDL117W 2658 nt5.27□□□□□ -1.57
UPF3P48412 BDP1YNL039W 1785 nt5.27□□□□□ -1.57
UPF3P48412 HPC2YBR215W 1878 nt5.26□□□□□ -1.57
UPF3P48412 EXO1YOR033C 2109 nt5.26□□□□□ -1.57
UPF3P48412 SIR1YKR101W 1965 nt5.26□□□□□ -1.57
UPF3P48412 GLT1YDL171C 6438 nt5.26□□□□□ -1.57
UPF3P48412 YGR022CYGR022C 330 nt5.26□□□□□ -1.57
UPF3P48412 MRP17YKL003C 396 nt5.26□□□□□ -1.57
UPF3P48412 UBC4YBR082C 447 nt5.26□□□□□ -1.57
UPF3P48412 CKS1YBR135W 453 nt5.26□□□□□ -1.57
UPF3P48412 MIF2YKL089W 1650 nt5.26□□□□□ -1.57
UPF3P48412 MNN2YBR015C 1794 nt5.26□□□□□ -1.57
UPF3P48412 SSZ1YHR064C 1617 nt5.26□□□□□ -1.57
UPF3P48412 ISR1YPR106W 1332 nt5.25□□□□□ -1.57
UPF3P48412 YOR1YGR281W 4434 nt5.25□□□□□ -1.57
UPF3P48412 PDC1YLR044C 1692 nt5.25□□□□□ -1.57
UPF3P48412 SMF3YLR034C 1422 nt5.25□□□□□ -1.57
UPF3P48412 snR57snR57 88 nt5.25□□□□□ -1.57
UPF3P48412 DBF4YDR052C 2115 nt5.25□□□□□ -1.57
UPF3P48412 CAF16YFL028C 870 nt5.25□□□□□ -1.57
UPF3P48412 DAN1YJR150C 897 nt5.25□□□□□ -1.57
UPF3P48412 YML101C-AYML101C-A 318 nt5.25□□□□□ -1.57
UPF3P48412 CAM1YPL048W 1248 nt5.25□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 71.3 ms