Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 RAP1YNL216W 2484 nt5.9□□□□□ -1.46
RPN11P43588 JIP4YDR475C 2631 nt5.9□□□□□ -1.46
RPN11P43588 ATF1YOR377W 1578 nt5.9□□□□□ -1.46
RPN11P43588 TYW3YGL050W 822 nt5.9□□□□□ -1.46
RPN11P43588 SIP2YGL208W 1248 nt5.9□□□□□ -1.46
RPN11P43588 MTF1YMR228W 1026 nt5.9□□□□□ -1.46
RPN11P43588 PRE2YPR103W 864 nt5.9□□□□□ -1.46
RPN11P43588 BRF1YGR246C 1791 nt5.9□□□□□ -1.47
RPN11P43588 RAT1YOR048C 3021 nt5.9□□□□□ -1.47
RPN11P43588 RRP1YDR087C 837 nt5.89□□□□□ -1.47
RPN11P43588 RSA3YLR221C 663 nt5.89□□□□□ -1.47
RPN11P43588 PDC1YLR044C 1692 nt5.88□□□□□ -1.47
RPN11P43588 RHO2YNL090W 579 nt5.88□□□□□ -1.47
RPN11P43588 SOL1YNR034W 966 nt5.88□□□□□ -1.47
RPN11P43588 ACC1YNR016C 6702 nt5.88□□□□□ -1.47
RPN11P43588 NGR1YBR212W 2019 nt5.87□□□□□ -1.47
RPN11P43588 FAT3YKL187C 2253 nt5.87□□□□□ -1.47
RPN11P43588 SNF8YPL002C 702 nt5.87□□□□□ -1.47
RPN11P43588 PDH1YPR002W 1551 nt5.87□□□□□ -1.47
RPN11P43588 KEX1YGL203C 2190 nt5.87□□□□□ -1.47
RPN11P43588 YDL032WYDL032W 312 nt5.86□□□□□ -1.47
RPN11P43588 UBI4YLL039C 1146 nt5.86□□□□□ -1.47
RPN11P43588 PAP2YOL115W 1755 nt5.85□□□□□ -1.47
RPN11P43588 MKK1YOR231W 1527 nt5.85□□□□□ -1.47
RPN11P43588 SLT2YHR030C 1455 nt5.85□□□□□ -1.47
RPN11P43588 DEF1YKL054C 2217 nt5.85□□□□□ -1.47
RPN11P43588 YCR085WYCR085W 354 nt5.85□□□□□ -1.47
RPN11P43588 MPM1YJL066C 759 nt5.85□□□□□ -1.47
RPN11P43588 SFT2YBL102W 648 nt5.85□□□□□ -1.47
RPN11P43588 YPR169W-AYPR169W-A 219 nt5.85□□□□□ -1.47
RPN11P43588 YPR170W-BYPR170W-B 258 nt5.85□□□□□ -1.47
RPN11P43588 YGL063C-AYGL063C-A 150 nt5.84□□□□□ -1.47
RPN11P43588 TPK1YJL164C 1194 nt5.84□□□□□ -1.47
RPN11P43588 MRPL24YMR193W 777 nt5.84□□□□□ -1.47
RPN11P43588 HXT14YNL318C 1623 nt5.84□□□□□ -1.47
RPN11P43588 GMC1YDR506C 1827 nt5.83□□□□□ -1.48
RPN11P43588 APM2YHL019C 1818 nt5.83□□□□□ -1.48
RPN11P43588 YDR161WYDR161W 1164 nt5.83□□□□□ -1.48
RPN11P43588 YFT2YDR319C 825 nt5.83□□□□□ -1.48
RPN11P43588 MID2YLR332W 1131 nt5.83□□□□□ -1.48
RPN11P43588 YNL194CYNL194C 906 nt5.83□□□□□ -1.48
RPN11P43588 YOL079WYOL079W 399 nt5.83□□□□□ -1.48
RPN11P43588 COA2YPL189C-A 207 nt5.83□□□□□ -1.48
RPN11P43588 ADE3YGR204W 2841 nt5.83□□□□□ -1.48
RPN11P43588 YFL042CYFL042C 2025 nt5.82□□□□□ -1.48
RPN11P43588 PPM1YDR435C 987 nt5.82□□□□□ -1.48
RPN11P43588 EAF5YEL018W 840 nt5.82□□□□□ -1.48
RPN11P43588 PIC2YER053C 903 nt5.82□□□□□ -1.48
RPN11P43588 MRPL15YLR312W-A 762 nt5.82□□□□□ -1.48
RPN11P43588 YML057C-AYML057C-A 390 nt5.82□□□□□ -1.48
RPN11P43588 ASK10YGR097W 3441 nt5.82□□□□□ -1.48
RPN11P43588 CSC1YLR241W 2349 nt5.82□□□□□ -1.48
RPN11P43588 FOL1YNL256W 2475 nt5.82□□□□□ -1.48
RPN11P43588 RSC2YLR357W 2670 nt5.81□□□□□ -1.48
RPN11P43588 PCL10YGL134W 1302 nt5.81□□□□□ -1.48
RPN11P43588 YMD8YML038C 1329 nt5.81□□□□□ -1.48
RPN11P43588 ATG18YFR021W 1503 nt5.81□□□□□ -1.48
RPN11P43588 YDL012CYDL012C 324 nt5.81□□□□□ -1.48
RPN11P43588 BUR6YER159C 429 nt5.81□□□□□ -1.48
RPN11P43588 PHA2YNL316C 1005 nt5.81□□□□□ -1.48
RPN11P43588 MRI1YPR118W 1236 nt5.81□□□□□ -1.48
RPN11P43588 ESC8YOL017W 2145 nt5.81□□□□□ -1.48
RPN11P43588 SDA1YGR245C 2304 nt5.81□□□□□ -1.48
RPN11P43588 RGD1YBR260C 2001 nt5.81□□□□□ -1.48
RPN11P43588 CLB4YLR210W 1383 nt5.8□□□□□ -1.48
RPN11P43588 RIO1YOR119C 1455 nt5.8□□□□□ -1.48
RPN11P43588 RPC53YDL150W 1269 nt5.8□□□□□ -1.48
RPN11P43588 AIR2YDL175C 1035 nt5.8□□□□□ -1.48
RPN11P43588 YBL081WYBL081W 1107 nt5.8□□□□□ -1.48
RPN11P43588 HIR2YOR038C 2628 nt5.8□□□□□ -1.48
RPN11P43588 KEX2YNL238W 2445 nt5.8□□□□□ -1.48
RPN11P43588 YBR138CYBR138C 1575 nt5.8□□□□□ -1.48
RPN11P43588 GLC3YEL011W 2115 nt5.8□□□□□ -1.48
RPN11P43588 RRP3YHR065C 1506 nt5.79□□□□□ -1.48
RPN11P43588 YCR023CYCR023C 1836 nt5.79□□□□□ -1.48
RPN11P43588 COX4YGL187C 468 nt5.79□□□□□ -1.48
RPN11P43588 SSK22YCR073C 3996 nt5.79□□□□□ -1.48
RPN11P43588 GDH2YDL215C 3279 nt5.79□□□□□ -1.48
RPN11P43588 DIT1YDR403W 1611 nt5.78□□□□□ -1.48
RPN11P43588 TMA17YDL110C 453 nt5.78□□□□□ -1.48
RPN11P43588 ISY1YJR050W 708 nt5.78□□□□□ -1.48
RPN11P43588 RFA2YNL312W 822 nt5.78□□□□□ -1.48
RPN11P43588 VMA2YBR127C 1554 nt5.78□□□□□ -1.48
RPN11P43588 RTC1YOL138C 4026 nt5.78□□□□□ -1.48
RPN11P43588 YOR379CYOR379C 339 nt5.77□□□□□ -1.49
RPN11P43588 YNL247WYNL247W 2304 nt5.77□□□□□ -1.49
RPN11P43588 COP1YDL145C 3606 nt5.77□□□□□ -1.49
RPN11P43588 RPS4BYHR203C 786 nt5.76□□□□□ -1.49
RPN11P43588 RPS4AYJR145C 786 nt5.76□□□□□ -1.49
RPN11P43588 HOR7YMR251W-A 180 nt5.76□□□□□ -1.49
RPN11P43588 HAL1YPR005C 885 nt5.76□□□□□ -1.49
RPN11P43588 RER1YCL001W 567 nt5.76□□□□□ -1.49
RPN11P43588 ARH1YDR376W 1482 nt5.76□□□□□ -1.49
RPN11P43588 YMR102CYMR102C 2505 nt5.75□□□□□ -1.49
RPN11P43588 ETT1YOR051C 1239 nt5.75□□□□□ -1.49
RPN11P43588 ALG5YPL227C 1005 nt5.75□□□□□ -1.49
RPN11P43588 APC4YDR118W 1959 nt5.75□□□□□ -1.49
RPN11P43588 RPN5YDL147W 1338 nt5.74□□□□□ -1.49
RPN11P43588 VPS72YDR485C 2388 nt5.74□□□□□ -1.49
RPN11P43588 NOP7YGR103W 1818 nt5.74□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms