Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF1P27539 MIR3621-201ENST00000580529 85 ntBASIC20.9■□□□□ 0.94
GDF1P27539 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.9■□□□□ 0.94
GDF1P27539 HLA-L-211ENST00000482052 1765 ntBASIC20.9■□□□□ 0.94
GDF1P27539 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDF1P27539 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF1P27539 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF1P27539 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF1P27539 AP003733.4-201ENST00000623785 1697 ntBASIC20.89■□□□□ 0.93
GDF1P27539 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF1P27539 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF1P27539 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF1P27539 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.88■□□□□ 0.93
GDF1P27539 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.88■□□□□ 0.93
GDF1P27539 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF1P27539 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.88■□□□□ 0.93
GDF1P27539 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.88■□□□□ 0.93
GDF1P27539 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.88■□□□□ 0.93
GDF1P27539 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF1P27539 AC142381.3-201ENST00000568208 1670 ntBASIC20.87■□□□□ 0.93
GDF1P27539 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF1P27539 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF1P27539 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF1P27539 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
GDF1P27539 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF1P27539 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 AC020928.2-201ENST00000588717 2197 ntBASIC20.86■□□□□ 0.93
GDF1P27539 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GDF1P27539 AC131281.2-201ENST00000520478 145 ntBASIC20.86■□□□□ 0.93
GDF1P27539 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.86■□□□□ 0.93
GDF1P27539 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF1P27539 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GDF1P27539 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
GDF1P27539 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF1P27539 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.85■□□□□ 0.93
GDF1P27539 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF1P27539 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.85■□□□□ 0.93
GDF1P27539 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF1P27539 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF1P27539 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF1P27539 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF1P27539 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
GDF1P27539 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 AC005703.6-201ENST00000623265 1329 ntBASIC20.84■□□□□ 0.93
GDF1P27539 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.84■□□□□ 0.93
GDF1P27539 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF1P27539 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.84■□□□□ 0.93
GDF1P27539 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
GDF1P27539 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF1P27539 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GDF1P27539 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF1P27539 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 AC138932.3-201ENST00000567634 1902 ntBASIC20.84■□□□□ 0.93
GDF1P27539 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GDF1P27539 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF1P27539 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF1P27539 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GDF1P27539 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
GDF1P27539 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.83■□□□□ 0.93
GDF1P27539 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.83■□□□□ 0.93
GDF1P27539 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDF1P27539 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GDF1P27539 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GDF1P27539 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GDF1P27539 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.82■□□□□ 0.92
GDF1P27539 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF1P27539 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GDF1P27539 AL136116.3-201ENST00000402907 1138 ntBASIC20.82■□□□□ 0.92
GDF1P27539 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.82■□□□□ 0.92
GDF1P27539 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF1P27539 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF1P27539 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF1P27539 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF1P27539 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF1P27539 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.81■□□□□ 0.92
GDF1P27539 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GDF1P27539 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GDF1P27539 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF1P27539 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF1P27539 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
GDF1P27539 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF1P27539 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.81■□□□□ 0.92
GDF1P27539 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.81■□□□□ 0.92
GDF1P27539 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GDF1P27539 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms