Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD40P25942 AC005703.6-201ENST00000623265 1329 ntBASIC19.9■□□□□ 0.78
CD40P25942 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.9■□□□□ 0.78
CD40P25942 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD40P25942 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CD40P25942 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD40P25942 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD40P25942 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD40P25942 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CD40P25942 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.89■□□□□ 0.77
CD40P25942 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.89■□□□□ 0.77
CD40P25942 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD40P25942 HLA-L-211ENST00000482052 1765 ntBASIC19.89■□□□□ 0.77
CD40P25942 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CD40P25942 AL512631.2-201ENST00000604634 923 ntBASIC19.89■□□□□ 0.77
CD40P25942 MIR4466-201ENST00000606121 54 ntBASIC19.89■□□□□ 0.77
CD40P25942 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.89■□□□□ 0.77
CD40P25942 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.89■□□□□ 0.77
CD40P25942 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD40P25942 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD40P25942 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CD40P25942 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.88■□□□□ 0.77
CD40P25942 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.88■□□□□ 0.77
CD40P25942 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CD40P25942 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD40P25942 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.88■□□□□ 0.77
CD40P25942 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.87■□□□□ 0.77
CD40P25942 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.87■□□□□ 0.77
CD40P25942 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.87■□□□□ 0.77
CD40P25942 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.87■□□□□ 0.77
CD40P25942 AP003733.4-201ENST00000623785 1697 ntBASIC19.87■□□□□ 0.77
CD40P25942 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD40P25942 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD40P25942 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.86■□□□□ 0.77
CD40P25942 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD40P25942 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CD40P25942 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CD40P25942 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD40P25942 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD40P25942 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.85■□□□□ 0.77
CD40P25942 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD40P25942 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CD40P25942 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.84■□□□□ 0.77
CD40P25942 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD40P25942 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CD40P25942 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.84■□□□□ 0.77
CD40P25942 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD40P25942 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.84■□□□□ 0.77
CD40P25942 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD40P25942 AL161729.1-201ENST00000604104 1402 ntBASIC19.84■□□□□ 0.77
CD40P25942 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD40P25942 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD40P25942 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD40P25942 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD40P25942 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.83■□□□□ 0.77
CD40P25942 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CD40P25942 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CD40P25942 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD40P25942 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD40P25942 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD40P25942 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD40P25942 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD40P25942 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.83■□□□□ 0.76
CD40P25942 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD40P25942 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CD40P25942 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
CD40P25942 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD40P25942 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.82■□□□□ 0.76
CD40P25942 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CD40P25942 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.82■□□□□ 0.76
CD40P25942 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD40P25942 AC142381.3-201ENST00000568208 1670 ntBASIC19.81■□□□□ 0.76
CD40P25942 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD40P25942 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CD40P25942 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.81■□□□□ 0.76
CD40P25942 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD40P25942 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.81■□□□□ 0.76
CD40P25942 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms