Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LAMP1P11279 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LAMP1P11279 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.79■■□□□ 1.08
LAMP1P11279 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.79■■□□□ 1.08
LAMP1P11279 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.79■■□□□ 1.08
LAMP1P11279 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.79■■□□□ 1.08
LAMP1P11279 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.79■■□□□ 1.08
LAMP1P11279 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LAMP1P11279 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LAMP1P11279 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LAMP1P11279 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.78■■□□□ 1.08
LAMP1P11279 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAMP1P11279 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAMP1P11279 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LAMP1P11279 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAMP1P11279 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LAMP1P11279 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAMP1P11279 AC139795.1-202ENST00000500444 432 ntBASIC21.78■■□□□ 1.08
LAMP1P11279 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAMP1P11279 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAMP1P11279 AC019171.1-201ENST00000601251 1056 ntBASIC21.78■■□□□ 1.08
LAMP1P11279 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.78■■□□□ 1.08
LAMP1P11279 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LAMP1P11279 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAMP1P11279 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.77■■□□□ 1.08
LAMP1P11279 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAMP1P11279 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.77■■□□□ 1.08
LAMP1P11279 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.77■■□□□ 1.08
LAMP1P11279 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAMP1P11279 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAMP1P11279 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LAMP1P11279 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAMP1P11279 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAMP1P11279 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAMP1P11279 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LAMP1P11279 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
LAMP1P11279 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAMP1P11279 AC011551.1-201ENST00000614101 683 ntBASIC21.76■■□□□ 1.07
LAMP1P11279 AC068473.5-201ENST00000616428 2072 ntBASIC21.76■■□□□ 1.07
LAMP1P11279 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.76■■□□□ 1.07
LAMP1P11279 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP1P11279 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP1P11279 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP1P11279 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP1P11279 AC004987.1-201ENST00000428627 508 ntBASIC21.75■■□□□ 1.07
LAMP1P11279 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.75■■□□□ 1.07
LAMP1P11279 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP1P11279 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP1P11279 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
LAMP1P11279 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.75■■□□□ 1.07
LAMP1P11279 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 AL161729.1-201ENST00000604104 1402 ntBASIC21.74■■□□□ 1.07
LAMP1P11279 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LAMP1P11279 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.74■■□□□ 1.07
LAMP1P11279 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.74■■□□□ 1.07
LAMP1P11279 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP1P11279 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMP1P11279 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LAMP1P11279 ATP5G2P3-201ENST00000429083 425 ntBASIC21.73■■□□□ 1.07
LAMP1P11279 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMP1P11279 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMP1P11279 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMP1P11279 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMP1P11279 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.72■■□□□ 1.07
LAMP1P11279 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LAMP1P11279 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 AC022616.5-201ENST00000518796 181 ntBASIC21.72■■□□□ 1.07
LAMP1P11279 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.72■■□□□ 1.07
LAMP1P11279 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.72■■□□□ 1.07
LAMP1P11279 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP1P11279 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LAMP1P11279 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.71■■□□□ 1.07
LAMP1P11279 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LAMP1P11279 AL022069.1-201ENST00000568025 1636 ntBASIC21.71■■□□□ 1.07
LAMP1P11279 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LAMP1P11279 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.71■■□□□ 1.07
LAMP1P11279 BHLHE23-202ENST00000612929 1109 ntBASIC21.71■■□□□ 1.07
LAMP1P11279 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
LAMP1P11279 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LAMP1P11279 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.71■■□□□ 1.07
LAMP1P11279 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LAMP1P11279 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LAMP1P11279 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.71■■□□□ 1.07
LAMP1P11279 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LAMP1P11279 C9orf163-202ENST00000624034 2573 ntBASIC21.7■■□□□ 1.06
LAMP1P11279 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LAMP1P11279 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms