Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNRPA1P09661 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.6■■■□□ 2.33
SNRPA1P09661 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.6■■■□□ 2.33
SNRPA1P09661 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.6■■■□□ 2.33
SNRPA1P09661 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SNRPA1P09661 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNRPA1P09661 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNRPA1P09661 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
SNRPA1P09661 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
SNRPA1P09661 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.59■■■□□ 2.33
SNRPA1P09661 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNRPA1P09661 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNRPA1P09661 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SNRPA1P09661 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SNRPA1P09661 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
SNRPA1P09661 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SNRPA1P09661 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNRPA1P09661 AC135279.3-201ENST00000610945 1311 ntBASIC29.57■■■□□ 2.32
SNRPA1P09661 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.57■■■□□ 2.32
SNRPA1P09661 AL031432.3-201ENST00000607698 485 ntBASIC29.57■■■□□ 2.32
SNRPA1P09661 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNRPA1P09661 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNRPA1P09661 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.56■■■□□ 2.32
SNRPA1P09661 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.56■■■□□ 2.32
SNRPA1P09661 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
SNRPA1P09661 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNRPA1P09661 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.56■■■□□ 2.32
SNRPA1P09661 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
SNRPA1P09661 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNRPA1P09661 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNRPA1P09661 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.55■■■□□ 2.32
SNRPA1P09661 AC024257.2-201ENST00000549699 147 ntBASIC29.55■■■□□ 2.32
SNRPA1P09661 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNRPA1P09661 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SNRPA1P09661 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNRPA1P09661 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNRPA1P09661 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNRPA1P09661 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.54■■■□□ 2.32
SNRPA1P09661 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.54■■■□□ 2.32
SNRPA1P09661 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNRPA1P09661 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.54■■■□□ 2.32
SNRPA1P09661 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.54■■■□□ 2.32
SNRPA1P09661 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNRPA1P09661 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNRPA1P09661 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.54■■■□□ 2.32
SNRPA1P09661 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.53■■■□□ 2.32
SNRPA1P09661 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.53■■■□□ 2.32
SNRPA1P09661 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.53■■■□□ 2.32
SNRPA1P09661 SUDS3P1-201ENST00000505831 966 ntBASIC29.53■■■□□ 2.32
SNRPA1P09661 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SNRPA1P09661 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
SNRPA1P09661 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
SNRPA1P09661 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SNRPA1P09661 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SNRPA1P09661 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.52■■■□□ 2.32
SNRPA1P09661 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SNRPA1P09661 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.52■■■□□ 2.32
SNRPA1P09661 AC142381.2-201ENST00000566120 298 ntBASIC29.52■■■□□ 2.32
SNRPA1P09661 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
SNRPA1P09661 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.52■■■□□ 2.32
SNRPA1P09661 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SNRPA1P09661 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNRPA1P09661 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNRPA1P09661 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNRPA1P09661 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNRPA1P09661 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.51■■■□□ 2.31
SNRPA1P09661 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNRPA1P09661 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SNRPA1P09661 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.5■■■□□ 2.31
SNRPA1P09661 DUX4L19-201ENST00000557448 1267 ntBASIC29.5■■■□□ 2.31
SNRPA1P09661 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.5■■■□□ 2.31
SNRPA1P09661 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNRPA1P09661 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNRPA1P09661 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SNRPA1P09661 EDA-201ENST00000338901 1233 ntBASIC29.49■■■□□ 2.31
SNRPA1P09661 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SNRPA1P09661 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
SNRPA1P09661 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.49■■■□□ 2.31
SNRPA1P09661 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNRPA1P09661 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.48■■■□□ 2.31
SNRPA1P09661 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNRPA1P09661 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNRPA1P09661 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNRPA1P09661 AC009102.2-201ENST00000606772 1639 ntBASIC29.48■■■□□ 2.31
SNRPA1P09661 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SNRPA1P09661 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNRPA1P09661 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.47■■■□□ 2.31
SNRPA1P09661 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNRPA1P09661 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
SNRPA1P09661 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.47■■■□□ 2.31
SNRPA1P09661 HLA-L-211ENST00000482052 1765 ntBASIC29.47■■■□□ 2.31
SNRPA1P09661 AC092171.4-201ENST00000609130 632 ntBASIC29.46■■■□□ 2.31
SNRPA1P09661 AL355001.2-201ENST00000620617 1191 ntBASIC29.46■■■□□ 2.31
SNRPA1P09661 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.46■■■□□ 2.31
SNRPA1P09661 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNRPA1P09661 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SNRPA1P09661 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SNRPA1P09661 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.45■■■□□ 2.31
SNRPA1P09661 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SNRPA1P09661 ZNRF2P3-201ENST00000424200 374 ntBASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms