Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H2ABP04908 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H2ABP04908 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H2ABP04908 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.84■□□□□ 0.93
HIST1H2ABP04908 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 TSPY13P-201ENST00000338964 914 ntBASIC20.83■□□□□ 0.93
HIST1H2ABP04908 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HIST1H2ABP04908 AC011551.1-201ENST00000614101 683 ntBASIC20.83■□□□□ 0.93
HIST1H2ABP04908 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H2ABP04908 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 ABCB10P4-201ENST00000566803 2184 ntBASIC20.82■□□□□ 0.92
HIST1H2ABP04908 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HIST1H2ABP04908 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2ABP04908 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H2ABP04908 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 AC012354.3-201ENST00000623734 483 ntBASIC20.79■□□□□ 0.92
HIST1H2ABP04908 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2ABP04908 AL161729.1-201ENST00000604104 1402 ntBASIC20.78■□□□□ 0.92
HIST1H2ABP04908 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2ABP04908 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.77■□□□□ 0.92
HIST1H2ABP04908 AC133561.1-201ENST00000568600 2415 ntBASIC20.77■□□□□ 0.92
HIST1H2ABP04908 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.77■□□□□ 0.91
HIST1H2ABP04908 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H2ABP04908 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
HIST1H2ABP04908 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
HIST1H2ABP04908 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
HIST1H2ABP04908 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HIST1H2ABP04908 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms