Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQA1P01909 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 DUSP8P3-201ENST00000399571 1760 ntBASIC17.24■□□□□ 0.35
HLA-DQA1P01909 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQA1P01909 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQA1P01909 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DQA1P01909 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQA1P01909 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA1P01909 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQA1P01909 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA1P01909 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1P01909 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1P01909 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms