Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDGFBP01127 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.51■■□□□ 1.35
PDGFBP01127 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
PDGFBP01127 AC009102.2-201ENST00000606772 1639 ntBASIC23.51■■□□□ 1.35
PDGFBP01127 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDGFBP01127 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDGFBP01127 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
PDGFBP01127 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.5■■□□□ 1.35
PDGFBP01127 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PDGFBP01127 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDGFBP01127 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.49■■□□□ 1.35
PDGFBP01127 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.49■■□□□ 1.35
PDGFBP01127 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.49■■□□□ 1.35
PDGFBP01127 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.49■■□□□ 1.35
PDGFBP01127 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.49■■□□□ 1.35
PDGFBP01127 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDGFBP01127 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDGFBP01127 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PDGFBP01127 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDGFBP01127 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.48■■□□□ 1.35
PDGFBP01127 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.48■■□□□ 1.35
PDGFBP01127 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.48■■□□□ 1.35
PDGFBP01127 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.48■■□□□ 1.35
PDGFBP01127 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDGFBP01127 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.48■■□□□ 1.35
PDGFBP01127 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDGFBP01127 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PDGFBP01127 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
PDGFBP01127 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PDGFBP01127 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDGFBP01127 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.46■■□□□ 1.35
PDGFBP01127 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PDGFBP01127 AC245100.8-202ENST00000629247 1058 ntBASIC23.46■■□□□ 1.35
PDGFBP01127 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.46■■□□□ 1.35
PDGFBP01127 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.35
PDGFBP01127 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PDGFBP01127 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PDGFBP01127 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.45■■□□□ 1.34
PDGFBP01127 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
PDGFBP01127 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PDGFBP01127 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PDGFBP01127 AC139426.1-201ENST00000568218 2529 ntBASIC23.44■■□□□ 1.34
PDGFBP01127 TSPY26P-201ENST00000476365 1326 ntBASIC23.44■■□□□ 1.34
PDGFBP01127 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.44■■□□□ 1.34
PDGFBP01127 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.44■■□□□ 1.34
PDGFBP01127 AC126544.1-201ENST00000580842 1059 ntBASIC23.44■■□□□ 1.34
PDGFBP01127 MIR6084-201ENST00000622012 110 ntBASIC23.44■■□□□ 1.34
PDGFBP01127 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PDGFBP01127 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PDGFBP01127 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
PDGFBP01127 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PDGFBP01127 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PDGFBP01127 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.43■■□□□ 1.34
PDGFBP01127 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.43■■□□□ 1.34
PDGFBP01127 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
PDGFBP01127 MIR3181-201ENST00000578512 73 ntBASIC23.43■■□□□ 1.34
PDGFBP01127 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PDGFBP01127 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.43■■□□□ 1.34
PDGFBP01127 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDGFBP01127 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PDGFBP01127 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PDGFBP01127 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.42■■□□□ 1.34
PDGFBP01127 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.42■■□□□ 1.34
PDGFBP01127 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.42■■□□□ 1.34
PDGFBP01127 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDGFBP01127 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PDGFBP01127 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.42■■□□□ 1.34
PDGFBP01127 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDGFBP01127 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PDGFBP01127 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.41■■□□□ 1.34
PDGFBP01127 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PDGFBP01127 NTF6G-201ENST00000591094 616 ntBASIC23.41■■□□□ 1.34
PDGFBP01127 C17orf82-201ENST00000623772 1530 ntBASIC23.41■■□□□ 1.34
PDGFBP01127 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDGFBP01127 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PDGFBP01127 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PDGFBP01127 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDGFBP01127 AC027612.3-201ENST00000413684 1047 ntBASIC23.4■■□□□ 1.34
PDGFBP01127 AC123595.1-201ENST00000440769 1046 ntBASIC23.4■■□□□ 1.34
PDGFBP01127 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.4■■□□□ 1.34
PDGFBP01127 CCDC92B-201ENST00000575506 885 ntBASIC23.4■■□□□ 1.34
PDGFBP01127 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.4■■□□□ 1.34
PDGFBP01127 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.4■■□□□ 1.34
PDGFBP01127 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDGFBP01127 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PDGFBP01127 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PDGFBP01127 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PDGFBP01127 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
PDGFBP01127 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.39■■□□□ 1.33
PDGFBP01127 ABHD17AP1-201ENST00000358206 933 ntBASIC23.39■■□□□ 1.33
PDGFBP01127 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
PDGFBP01127 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.39■■□□□ 1.33
PDGFBP01127 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.39■■□□□ 1.33
PDGFBP01127 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 264.6 ms