Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
BRD4O60885 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
BRD4O60885 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
BRD4O60885 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.03■■■□□ 2.72
BRD4O60885 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.03■■■□□ 2.72
BRD4O60885 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC32.02■■■□□ 2.72
BRD4O60885 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
BRD4O60885 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.01■■■□□ 2.71
BRD4O60885 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
BRD4O60885 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
BRD4O60885 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC32.01■■■□□ 2.71
BRD4O60885 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
BRD4O60885 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC32■■■□□ 2.71
BRD4O60885 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
BRD4O60885 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC32■■■□□ 2.71
BRD4O60885 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
BRD4O60885 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.99■■■□□ 2.71
BRD4O60885 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.99■■■□□ 2.71
BRD4O60885 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
BRD4O60885 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
BRD4O60885 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
BRD4O60885 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
BRD4O60885 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
BRD4O60885 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
BRD4O60885 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
BRD4O60885 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.97■■■□□ 2.71
BRD4O60885 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
BRD4O60885 AC135731.1-201ENST00000569415 2548 ntBASIC31.97■■■□□ 2.71
BRD4O60885 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
BRD4O60885 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
BRD4O60885 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
BRD4O60885 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
BRD4O60885 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.94■■■□□ 2.7
BRD4O60885 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.94■■■□□ 2.7
BRD4O60885 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.94■■■□□ 2.7
BRD4O60885 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.94■■■□□ 2.7
BRD4O60885 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BRD4O60885 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
BRD4O60885 MIR6089-201ENST00000616698 64 ntBASIC31.94■■■□□ 2.7
BRD4O60885 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
BRD4O60885 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BRD4O60885 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
BRD4O60885 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BRD4O60885 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BRD4O60885 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.93■■■□□ 2.7
BRD4O60885 AL031432.3-201ENST00000607698 485 ntBASIC31.93■■■□□ 2.7
BRD4O60885 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
BRD4O60885 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
BRD4O60885 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
BRD4O60885 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.92■■■□□ 2.7
BRD4O60885 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.92■■■□□ 2.7
BRD4O60885 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
BRD4O60885 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
BRD4O60885 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
BRD4O60885 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.91■■■□□ 2.7
BRD4O60885 AC004448.1-201ENST00000458332 883 ntBASIC31.91■■■□□ 2.7
BRD4O60885 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.91■■■□□ 2.7
BRD4O60885 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BRD4O60885 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
BRD4O60885 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BRD4O60885 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BRD4O60885 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.9■■■□□ 2.7
BRD4O60885 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BRD4O60885 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BRD4O60885 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.89■■■□□ 2.7
BRD4O60885 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.89■■■□□ 2.7
BRD4O60885 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
BRD4O60885 AP003733.4-201ENST00000623785 1697 ntBASIC31.89■■■□□ 2.7
BRD4O60885 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
BRD4O60885 SUDS3P1-201ENST00000505831 966 ntBASIC31.89■■■□□ 2.7
BRD4O60885 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.89■■■□□ 2.7
BRD4O60885 AL139125.2-201ENST00000623134 1869 ntBASIC31.89■■■□□ 2.7
BRD4O60885 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.88■■■□□ 2.69
BRD4O60885 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
BRD4O60885 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
BRD4O60885 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
BRD4O60885 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.88■■■□□ 2.69
BRD4O60885 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
BRD4O60885 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
BRD4O60885 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.87■■■□□ 2.69
BRD4O60885 PBX2P1-201ENST00000493219 1291 ntBASIC31.87■■■□□ 2.69
BRD4O60885 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
BRD4O60885 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.87■■■□□ 2.69
BRD4O60885 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
BRD4O60885 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
BRD4O60885 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
BRD4O60885 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
BRD4O60885 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
BRD4O60885 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
BRD4O60885 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BRD4O60885 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.85■■■□□ 2.69
BRD4O60885 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.85■■■□□ 2.69
BRD4O60885 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
BRD4O60885 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
BRD4O60885 UNC93B3-201ENST00000308076 687 ntBASIC31.84■■■□□ 2.69
BRD4O60885 SRD5A1P1-201ENST00000442297 786 ntBASIC31.84■■■□□ 2.69
BRD4O60885 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.84■■■□□ 2.69
BRD4O60885 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
BRD4O60885 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
BRD4O60885 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms