Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.81■■■□□ 2.36
KCNQ3O43525 UNC93B3-201ENST00000308076 687 ntBASIC29.81■■■□□ 2.36
KCNQ3O43525 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
KCNQ3O43525 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNQ3O43525 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNQ3O43525 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ3O43525 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ3O43525 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ3O43525 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.8■■■□□ 2.36
KCNQ3O43525 PBX2P1-201ENST00000493219 1291 ntBASIC29.8■■■□□ 2.36
KCNQ3O43525 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.8■■■□□ 2.36
KCNQ3O43525 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
KCNQ3O43525 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ3O43525 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ3O43525 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ3O43525 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ3O43525 AC005703.6-201ENST00000623265 1329 ntBASIC29.79■■■□□ 2.36
KCNQ3O43525 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ3O43525 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
KCNQ3O43525 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
KCNQ3O43525 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
KCNQ3O43525 AL031432.3-201ENST00000607698 485 ntBASIC29.77■■■□□ 2.36
KCNQ3O43525 AC106739.1-201ENST00000617035 715 ntBASIC29.77■■■□□ 2.36
KCNQ3O43525 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
KCNQ3O43525 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.76■■■□□ 2.36
KCNQ3O43525 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.36
KCNQ3O43525 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 HLA-L-211ENST00000482052 1765 ntBASIC29.76■■■□□ 2.35
KCNQ3O43525 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.76■■■□□ 2.35
KCNQ3O43525 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ3O43525 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
KCNQ3O43525 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.75■■■□□ 2.35
KCNQ3O43525 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KCNQ3O43525 AC133561.4-201ENST00000566112 224 ntBASIC29.75■■■□□ 2.35
KCNQ3O43525 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.75■■■□□ 2.35
KCNQ3O43525 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KCNQ3O43525 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.74■■■□□ 2.35
KCNQ3O43525 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ3O43525 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.73■■■□□ 2.35
KCNQ3O43525 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
KCNQ3O43525 SRD5A1P1-201ENST00000442297 786 ntBASIC29.73■■■□□ 2.35
KCNQ3O43525 AL136162.1-201ENST00000607711 1078 ntBASIC29.73■■■□□ 2.35
KCNQ3O43525 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.73■■■□□ 2.35
KCNQ3O43525 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.73■■■□□ 2.35
KCNQ3O43525 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.73■■■□□ 2.35
KCNQ3O43525 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.73■■■□□ 2.35
KCNQ3O43525 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.72■■■□□ 2.35
KCNQ3O43525 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNQ3O43525 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNQ3O43525 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.72■■■□□ 2.35
KCNQ3O43525 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNQ3O43525 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNQ3O43525 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KCNQ3O43525 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNQ3O43525 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KCNQ3O43525 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.71■■■□□ 2.35
KCNQ3O43525 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.71■■■□□ 2.35
KCNQ3O43525 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.71■■■□□ 2.35
KCNQ3O43525 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
KCNQ3O43525 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
KCNQ3O43525 AC024257.2-201ENST00000549699 147 ntBASIC29.71■■■□□ 2.35
KCNQ3O43525 AL022069.1-201ENST00000568025 1636 ntBASIC29.71■■■□□ 2.35
KCNQ3O43525 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
KCNQ3O43525 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
KCNQ3O43525 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.7■■■□□ 2.35
KCNQ3O43525 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.7■■■□□ 2.35
KCNQ3O43525 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.7■■■□□ 2.35
KCNQ3O43525 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
KCNQ3O43525 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
KCNQ3O43525 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.7■■■□□ 2.34
KCNQ3O43525 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KCNQ3O43525 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.69■■■□□ 2.34
KCNQ3O43525 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KCNQ3O43525 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.69■■■□□ 2.34
KCNQ3O43525 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KCNQ3O43525 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.69■■■□□ 2.34
KCNQ3O43525 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
KCNQ3O43525 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.68■■■□□ 2.34
KCNQ3O43525 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.68■■■□□ 2.34
KCNQ3O43525 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNQ3O43525 AC022211.4-201ENST00000625094 2161 ntBASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms