Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.97■■□□□ 1.43
MSI1O43347 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.97■■□□□ 1.43
MSI1O43347 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
MSI1O43347 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSI1O43347 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.96■■□□□ 1.43
MSI1O43347 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.96■■□□□ 1.43
MSI1O43347 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
MSI1O43347 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSI1O43347 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.96■■□□□ 1.43
MSI1O43347 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.96■■□□□ 1.43
MSI1O43347 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.96■■□□□ 1.43
MSI1O43347 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSI1O43347 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.96■■□□□ 1.43
MSI1O43347 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
MSI1O43347 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.95■■□□□ 1.43
MSI1O43347 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
MSI1O43347 AL022069.1-201ENST00000568025 1636 ntBASIC23.95■■□□□ 1.43
MSI1O43347 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
MSI1O43347 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSI1O43347 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
MSI1O43347 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.95■■□□□ 1.42
MSI1O43347 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSI1O43347 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.95■■□□□ 1.42
MSI1O43347 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.95■■□□□ 1.42
MSI1O43347 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.95■■□□□ 1.42
MSI1O43347 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.95■■□□□ 1.42
MSI1O43347 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.95■■□□□ 1.42
MSI1O43347 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
MSI1O43347 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSI1O43347 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
MSI1O43347 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.95■■□□□ 1.42
MSI1O43347 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
MSI1O43347 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSI1O43347 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MSI1O43347 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSI1O43347 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
MSI1O43347 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSI1O43347 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSI1O43347 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.94■■□□□ 1.42
MSI1O43347 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
MSI1O43347 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MSI1O43347 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSI1O43347 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.93■■□□□ 1.42
MSI1O43347 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
MSI1O43347 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MSI1O43347 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSI1O43347 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.93■■□□□ 1.42
MSI1O43347 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.93■■□□□ 1.42
MSI1O43347 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.93■■□□□ 1.42
MSI1O43347 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.93■■□□□ 1.42
MSI1O43347 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.93■■□□□ 1.42
MSI1O43347 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.93■■□□□ 1.42
MSI1O43347 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSI1O43347 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MSI1O43347 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSI1O43347 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.92■■□□□ 1.42
MSI1O43347 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
MSI1O43347 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MSI1O43347 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.92■■□□□ 1.42
MSI1O43347 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.92■■□□□ 1.42
MSI1O43347 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MSI1O43347 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSI1O43347 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSI1O43347 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.91■■□□□ 1.42
MSI1O43347 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSI1O43347 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.91■■□□□ 1.42
MSI1O43347 MIR6724-1-201ENST00000616420 92 ntBASIC23.91■■□□□ 1.42
MSI1O43347 MIR6724-2-201ENST00000616483 92 ntBASIC23.91■■□□□ 1.42
MSI1O43347 MIR6722-201ENST00000617286 78 ntBASIC23.91■■□□□ 1.42
MSI1O43347 MIR6724-4-201ENST00000617390 92 ntBASIC23.91■■□□□ 1.42
MSI1O43347 MIR6724-3-201ENST00000622482 92 ntBASIC23.91■■□□□ 1.42
MSI1O43347 AL139125.2-201ENST00000623134 1869 ntBASIC23.91■■□□□ 1.42
MSI1O43347 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.91■■□□□ 1.42
MSI1O43347 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSI1O43347 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSI1O43347 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
MSI1O43347 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
MSI1O43347 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
MSI1O43347 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
MSI1O43347 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.89■■□□□ 1.41
MSI1O43347 LINC01124-201ENST00000409786 2117 ntBASIC23.89■■□□□ 1.41
MSI1O43347 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSI1O43347 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.88■■□□□ 1.41
MSI1O43347 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.88■■□□□ 1.41
MSI1O43347 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
MSI1O43347 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
MSI1O43347 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MSI1O43347 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.88■■□□□ 1.41
MSI1O43347 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSI1O43347 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSI1O43347 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSI1O43347 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.87■■□□□ 1.41
MSI1O43347 AL117332.1-201ENST00000622628 974 ntBASIC23.87■■□□□ 1.41
MSI1O43347 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
MSI1O43347 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
MSI1O43347 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSI1O43347 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSI1O43347 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.86■■□□□ 1.41
MSI1O43347 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSI1O43347 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms