Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MID1O15344 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.13■■□□□ 1.29
MID1O15344 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
MID1O15344 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MID1O15344 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
MID1O15344 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MID1O15344 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MID1O15344 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.12■■□□□ 1.29
MID1O15344 AL022069.1-201ENST00000568025 1636 ntBASIC23.12■■□□□ 1.29
MID1O15344 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MID1O15344 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.12■■□□□ 1.29
MID1O15344 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.12■■□□□ 1.29
MID1O15344 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.12■■□□□ 1.29
MID1O15344 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
MID1O15344 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MID1O15344 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MID1O15344 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.11■■□□□ 1.29
MID1O15344 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
MID1O15344 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.11■■□□□ 1.29
MID1O15344 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
MID1O15344 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.11■■□□□ 1.29
MID1O15344 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MID1O15344 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MID1O15344 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MID1O15344 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.1■■□□□ 1.29
MID1O15344 SRD5A1P1-201ENST00000442297 786 ntBASIC23.1■■□□□ 1.29
MID1O15344 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MID1O15344 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.1■■□□□ 1.29
MID1O15344 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MID1O15344 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
MID1O15344 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.1■■□□□ 1.29
MID1O15344 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MID1O15344 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
MID1O15344 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MID1O15344 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
MID1O15344 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.09■■□□□ 1.29
MID1O15344 AC005837.3-201ENST00000612163 286 ntBASIC23.09■■□□□ 1.29
MID1O15344 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
MID1O15344 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.08■■□□□ 1.29
MID1O15344 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.08■■□□□ 1.29
MID1O15344 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MID1O15344 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MID1O15344 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
MID1O15344 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
MID1O15344 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MID1O15344 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
MID1O15344 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MID1O15344 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MID1O15344 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
MID1O15344 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.07■■□□□ 1.28
MID1O15344 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.07■■□□□ 1.28
MID1O15344 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.07■■□□□ 1.28
MID1O15344 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MID1O15344 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.07■■□□□ 1.28
MID1O15344 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
MID1O15344 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 UNC93B3-201ENST00000308076 687 ntBASIC23.06■■□□□ 1.28
MID1O15344 MIR935-201ENST00000401179 91 ntBASIC23.06■■□□□ 1.28
MID1O15344 PBX2P1-201ENST00000493219 1291 ntBASIC23.06■■□□□ 1.28
MID1O15344 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.06■■□□□ 1.28
MID1O15344 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.06■■□□□ 1.28
MID1O15344 HLA-L-211ENST00000482052 1765 ntBASIC23.06■■□□□ 1.28
MID1O15344 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MID1O15344 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.05■■□□□ 1.28
MID1O15344 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
MID1O15344 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MID1O15344 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
MID1O15344 AC106739.1-201ENST00000617035 715 ntBASIC23.05■■□□□ 1.28
MID1O15344 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
MID1O15344 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 AC133561.4-201ENST00000566112 224 ntBASIC23.04■■□□□ 1.28
MID1O15344 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.04■■□□□ 1.28
MID1O15344 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MID1O15344 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MID1O15344 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.03■■□□□ 1.28
MID1O15344 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MID1O15344 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
MID1O15344 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.03■■□□□ 1.28
MID1O15344 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MID1O15344 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MID1O15344 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
MID1O15344 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
MID1O15344 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.02■■□□□ 1.28
MID1O15344 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms