Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RTL8CO15255 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.37■□□□□ 0.05
RTL8CO15255 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RTL8CO15255 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.37■□□□□ 0.05
RTL8CO15255 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.37■□□□□ 0.05
RTL8CO15255 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 AC011298.3-201ENST00000615796 283 ntBASIC15.37■□□□□ 0.05
RTL8CO15255 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTL8CO15255 AC097639.1-201ENST00000565519 1891 ntBASIC15.37■□□□□ 0.05
RTL8CO15255 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RTL8CO15255 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.36■□□□□ 0.05
RTL8CO15255 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.36■□□□□ 0.05
RTL8CO15255 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTL8CO15255 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTL8CO15255 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTL8CO15255 AC099791.1-201ENST00000416440 715 ntBASIC15.36■□□□□ 0.05
RTL8CO15255 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.36■□□□□ 0.05
RTL8CO15255 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.36■□□□□ 0.05
RTL8CO15255 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.36■□□□□ 0.05
RTL8CO15255 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.36■□□□□ 0.05
RTL8CO15255 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.36■□□□□ 0.05
RTL8CO15255 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
RTL8CO15255 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.36■□□□□ 0.05
RTL8CO15255 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.36■□□□□ 0.05
RTL8CO15255 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RTL8CO15255 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTL8CO15255 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RTL8CO15255 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTL8CO15255 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RTL8CO15255 AL138724.1-201ENST00000606771 1088 ntBASIC15.35■□□□□ 0.05
RTL8CO15255 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTL8CO15255 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTL8CO15255 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTL8CO15255 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTL8CO15255 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.35■□□□□ 0.05
RTL8CO15255 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC15.35■□□□□ 0.05
RTL8CO15255 AC096887.2-201ENST00000623443 1957 ntBASIC15.35■□□□□ 0.05
RTL8CO15255 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RTL8CO15255 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.34■□□□□ 0.05
RTL8CO15255 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC15.34■□□□□ 0.05
RTL8CO15255 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL8CO15255 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTL8CO15255 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RTL8CO15255 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RTL8CO15255 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC15.33■□□□□ 0.05
RTL8CO15255 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 AC090192.1-201ENST00000517740 490 ntBASIC15.33■□□□□ 0.04
RTL8CO15255 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.33■□□□□ 0.04
RTL8CO15255 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.33■□□□□ 0.04
RTL8CO15255 RARRES2P11-201ENST00000635158 484 ntBASIC15.33■□□□□ 0.04
RTL8CO15255 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL8CO15255 ERN1-208ENST00000606895 2068 ntBASIC15.32■□□□□ 0.04
RTL8CO15255 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.32■□□□□ 0.04
RTL8CO15255 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTL8CO15255 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.32■□□□□ 0.04
RTL8CO15255 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.32■□□□□ 0.04
RTL8CO15255 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL8CO15255 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTL8CO15255 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.32■□□□□ 0.04
RTL8CO15255 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL8CO15255 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTL8CO15255 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL8CO15255 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.32■□□□□ 0.04
RTL8CO15255 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL8CO15255 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL8CO15255 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTL8CO15255 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTL8CO15255 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL8CO15255 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms