Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDX4O14627 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDX4O14627 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CDX4O14627 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDX4O14627 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CDX4O14627 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDX4O14627 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.51■■□□□ 1.19
CDX4O14627 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDX4O14627 BX842568.3-201ENST00000418104 571 ntBASIC22.51■■□□□ 1.19
CDX4O14627 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.51■■□□□ 1.19
CDX4O14627 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.51■■□□□ 1.19
CDX4O14627 AL031602.1-201ENST00000633169 911 ntBASIC22.51■■□□□ 1.19
CDX4O14627 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDX4O14627 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDX4O14627 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDX4O14627 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDX4O14627 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.5■■□□□ 1.19
CDX4O14627 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.5■■□□□ 1.19
CDX4O14627 SLC47A1P1-202ENST00000449666 945 ntBASIC22.5■■□□□ 1.19
CDX4O14627 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDX4O14627 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDX4O14627 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.5■■□□□ 1.19
CDX4O14627 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.5■■□□□ 1.19
CDX4O14627 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.5■■□□□ 1.19
CDX4O14627 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.49■■□□□ 1.19
CDX4O14627 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDX4O14627 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDX4O14627 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.49■■□□□ 1.19
CDX4O14627 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDX4O14627 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.49■■□□□ 1.19
CDX4O14627 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDX4O14627 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.49■■□□□ 1.19
CDX4O14627 AC096887.2-201ENST00000623443 1957 ntBASIC22.49■■□□□ 1.19
CDX4O14627 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
CDX4O14627 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
CDX4O14627 YBX1P1-201ENST00000445822 960 ntBASIC22.48■■□□□ 1.19
CDX4O14627 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDX4O14627 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.47■■□□□ 1.19
CDX4O14627 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDX4O14627 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.47■■□□□ 1.19
CDX4O14627 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.47■■□□□ 1.19
CDX4O14627 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.47■■□□□ 1.19
CDX4O14627 AC241377.3-202ENST00000626088 1088 ntBASIC22.47■■□□□ 1.19
CDX4O14627 AC241585.3-202ENST00000628937 1088 ntBASIC22.47■■□□□ 1.19
CDX4O14627 AC245100.8-202ENST00000629247 1058 ntBASIC22.47■■□□□ 1.19
CDX4O14627 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDX4O14627 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDX4O14627 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDX4O14627 AC131274.2-201ENST00000580697 1507 ntBASIC22.47■■□□□ 1.19
CDX4O14627 C17orf82-201ENST00000623772 1530 ntBASIC22.47■■□□□ 1.19
CDX4O14627 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CDX4O14627 ID1-201ENST00000376105 1233 ntBASIC22.46■■□□□ 1.19
CDX4O14627 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CDX4O14627 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CDX4O14627 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.46■■□□□ 1.19
CDX4O14627 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L2-201ENST00000561772 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.46■■□□□ 1.19
CDX4O14627 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L6-201ENST00000626483 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L1-201ENST00000627662 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L8-201ENST00000629013 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L3-201ENST00000630187 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L7-201ENST00000630678 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 DUX4L5-201ENST00000630834 1275 ntBASIC22.46■■□□□ 1.19
CDX4O14627 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.46■■□□□ 1.19
CDX4O14627 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDX4O14627 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDX4O14627 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDX4O14627 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CDX4O14627 AC006455.2-201ENST00000429931 906 ntBASIC22.45■■□□□ 1.18
CDX4O14627 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.45■■□□□ 1.18
CDX4O14627 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.45■■□□□ 1.18
CDX4O14627 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CDX4O14627 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDX4O14627 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDX4O14627 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CDX4O14627 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDX4O14627 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDX4O14627 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDX4O14627 AC004911.1-201ENST00000416316 871 ntBASIC22.44■■□□□ 1.18
CDX4O14627 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.44■■□□□ 1.18
CDX4O14627 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
CDX4O14627 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.44■■□□□ 1.18
CDX4O14627 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDX4O14627 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.43■■□□□ 1.18
CDX4O14627 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDX4O14627 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDX4O14627 MIR3181-201ENST00000578512 73 ntBASIC22.43■■□□□ 1.18
CDX4O14627 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.43■■□□□ 1.18
CDX4O14627 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CDX4O14627 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDX4O14627 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDX4O14627 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDX4O14627 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDX4O14627 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.42■■□□□ 1.18
CDX4O14627 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CDX4O14627 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.42■■□□□ 1.18
CDX4O14627 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.42■■□□□ 1.18
CDX4O14627 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms