Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF223E7ERA6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF223E7ERA6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF223E7ERA6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF223E7ERA6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF223E7ERA6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF223E7ERA6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF223E7ERA6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF223E7ERA6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF223E7ERA6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF223E7ERA6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF223E7ERA6 AC099791.1-201ENST00000416440 715 ntBASIC19.16■□□□□ 0.66
RNF223E7ERA6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF223E7ERA6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF223E7ERA6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF223E7ERA6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF223E7ERA6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF223E7ERA6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF223E7ERA6 AC011298.3-201ENST00000615796 283 ntBASIC19.15■□□□□ 0.66
RNF223E7ERA6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF223E7ERA6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF223E7ERA6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF223E7ERA6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF223E7ERA6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
RNF223E7ERA6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF223E7ERA6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNF223E7ERA6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF223E7ERA6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF223E7ERA6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF223E7ERA6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RNF223E7ERA6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF223E7ERA6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF223E7ERA6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF223E7ERA6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF223E7ERA6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF223E7ERA6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF223E7ERA6 AL138724.1-201ENST00000606771 1088 ntBASIC19.13■□□□□ 0.65
RNF223E7ERA6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF223E7ERA6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
RNF223E7ERA6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF223E7ERA6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF223E7ERA6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF223E7ERA6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF223E7ERA6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF223E7ERA6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF223E7ERA6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 AC131274.2-201ENST00000580697 1507 ntBASIC19.11■□□□□ 0.65
RNF223E7ERA6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF223E7ERA6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF223E7ERA6 AC009102.2-201ENST00000606772 1639 ntBASIC19.11■□□□□ 0.65
RNF223E7ERA6 AC010501.1-201ENST00000606270 1962 ntBASIC19.1■□□□□ 0.65
RNF223E7ERA6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF223E7ERA6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF223E7ERA6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF223E7ERA6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF223E7ERA6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF223E7ERA6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF223E7ERA6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF223E7ERA6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF223E7ERA6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF223E7ERA6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF223E7ERA6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF223E7ERA6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF223E7ERA6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF223E7ERA6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF223E7ERA6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF223E7ERA6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF223E7ERA6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF223E7ERA6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF223E7ERA6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF223E7ERA6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF223E7ERA6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF223E7ERA6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF223E7ERA6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF223E7ERA6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF223E7ERA6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms