Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGB1A6NKQ9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.32■□□□□ 0.52
CGB1A6NKQ9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 AC019171.1-201ENST00000601251 1056 ntBASIC18.31■□□□□ 0.52
CGB1A6NKQ9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CGB1A6NKQ9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 AC004987.1-201ENST00000428627 508 ntBASIC18.3■□□□□ 0.52
CGB1A6NKQ9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CGB1A6NKQ9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGB1A6NKQ9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CGB1A6NKQ9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 ATP5G2P3-201ENST00000429083 425 ntBASIC18.27■□□□□ 0.52
CGB1A6NKQ9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 AC139795.1-202ENST00000500444 432 ntBASIC18.27■□□□□ 0.52
CGB1A6NKQ9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 PVT1_1.1-201ENST00000615125 194 ntBASIC18.27■□□□□ 0.52
CGB1A6NKQ9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CGB1A6NKQ9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.27■□□□□ 0.51
CGB1A6NKQ9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 DUSP8P5-201ENST00000422884 1815 ntBASIC18.26■□□□□ 0.51
CGB1A6NKQ9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 AC011551.1-201ENST00000614101 683 ntBASIC18.26■□□□□ 0.51
CGB1A6NKQ9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms