Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM235A6NFC5 AC093536.1-201ENST00000569153 554 ntBASIC19.58■□□□□ 0.72
TMEM235A6NFC5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM235A6NFC5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM235A6NFC5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.58■□□□□ 0.72
TMEM235A6NFC5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEM235A6NFC5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM235A6NFC5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM235A6NFC5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TMEM235A6NFC5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 EP400NL-214ENST00000641289 2402 ntBASIC19.56■□□□□ 0.72
TMEM235A6NFC5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM235A6NFC5 ANOS2P-203ENST00000472227 1816 ntBASIC19.55■□□□□ 0.72
TMEM235A6NFC5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 ABHD17AP4-201ENST00000411545 909 ntBASIC19.55■□□□□ 0.72
TMEM235A6NFC5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM235A6NFC5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM235A6NFC5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 ECEL1P2-201ENST00000461596 1295 ntBASIC19.53■□□□□ 0.72
TMEM235A6NFC5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM235A6NFC5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TMEM235A6NFC5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM235A6NFC5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM235A6NFC5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM235A6NFC5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM235A6NFC5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM235A6NFC5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM235A6NFC5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM235A6NFC5 C1orf229-201ENST00000623686 2258 ntBASIC19.5■□□□□ 0.71
TMEM235A6NFC5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM235A6NFC5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM235A6NFC5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms