Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MEIS3P1A6NDR6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 ZNRF2P2-203ENST00000454624 420 ntBASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 AC025884.2-201ENST00000553429 711 ntBASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 MIR3960-201ENST00000583311 91 ntBASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MEIS3P1A6NDR6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 C1orf229-201ENST00000623686 2258 ntBASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MEIS3P1A6NDR6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
MEIS3P1A6NDR6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MEIS3P1A6NDR6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
MEIS3P1A6NDR6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MEIS3P1A6NDR6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MEIS3P1A6NDR6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MEIS3P1A6NDR6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 FOXO3B-201ENST00000395675 1928 ntBASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 ANOS2P-203ENST00000472227 1816 ntBASIC19.58■□□□□ 0.72
MEIS3P1A6NDR6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MEIS3P1A6NDR6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MEIS3P1A6NDR6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms