Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC34.47■■■■□ 3.11
HFM1A2PYH4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
HFM1A2PYH4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
HFM1A2PYH4 RASSF1-AS1-201ENST00000629828 790 ntBASIC34.46■■■■□ 3.11
HFM1A2PYH4 AL161729.1-201ENST00000604104 1402 ntBASIC34.46■■■■□ 3.11
HFM1A2PYH4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
HFM1A2PYH4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC34.45■■■■□ 3.11
HFM1A2PYH4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC34.45■■■■□ 3.11
HFM1A2PYH4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
HFM1A2PYH4 AL022069.1-201ENST00000568025 1636 ntBASIC34.45■■■■□ 3.11
HFM1A2PYH4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
HFM1A2PYH4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
HFM1A2PYH4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
HFM1A2PYH4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
HFM1A2PYH4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC34.44■■■■□ 3.1
HFM1A2PYH4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.44■■■■□ 3.1
HFM1A2PYH4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
HFM1A2PYH4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
HFM1A2PYH4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC34.43■■■■□ 3.1
HFM1A2PYH4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC34.43■■■■□ 3.1
HFM1A2PYH4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
HFM1A2PYH4 EED-207ENST00000528180 1745 ntTSL 5 BASIC34.42■■■■□ 3.1
HFM1A2PYH4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC34.42■■■■□ 3.1
HFM1A2PYH4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC34.42■■■■□ 3.1
HFM1A2PYH4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.42■■■■□ 3.1
HFM1A2PYH4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
HFM1A2PYH4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
HFM1A2PYH4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.41■■■■□ 3.1
HFM1A2PYH4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.41■■■■□ 3.1
HFM1A2PYH4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC34.41■■■■□ 3.1
HFM1A2PYH4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
HFM1A2PYH4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.4■■■■□ 3.1
HFM1A2PYH4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC34.4■■■■□ 3.1
HFM1A2PYH4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
HFM1A2PYH4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
HFM1A2PYH4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC34.4■■■■□ 3.1
HFM1A2PYH4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
HFM1A2PYH4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
HFM1A2PYH4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC34.39■■■■□ 3.1
HFM1A2PYH4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
HFM1A2PYH4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
HFM1A2PYH4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
HFM1A2PYH4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
HFM1A2PYH4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC34.37■■■■□ 3.09
HFM1A2PYH4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.37■■■■□ 3.09
HFM1A2PYH4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
HFM1A2PYH4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
HFM1A2PYH4 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.36■■■■□ 3.09
HFM1A2PYH4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
HFM1A2PYH4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
HFM1A2PYH4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC34.35■■■■□ 3.09
HFM1A2PYH4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC34.35■■■■□ 3.09
HFM1A2PYH4 MIR4466-201ENST00000606121 54 ntBASIC34.35■■■■□ 3.09
HFM1A2PYH4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC34.35■■■■□ 3.09
HFM1A2PYH4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
HFM1A2PYH4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC34.35■■■■□ 3.09
HFM1A2PYH4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC34.34■■■■□ 3.09
HFM1A2PYH4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
HFM1A2PYH4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
HFM1A2PYH4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
HFM1A2PYH4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
HFM1A2PYH4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
HFM1A2PYH4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
HFM1A2PYH4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
HFM1A2PYH4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC34.33■■■■□ 3.09
HFM1A2PYH4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
HFM1A2PYH4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
HFM1A2PYH4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC34.32■■■■□ 3.08
HFM1A2PYH4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC34.32■■■■□ 3.08
HFM1A2PYH4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HFM1A2PYH4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC34.31■■■■□ 3.08
HFM1A2PYH4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
HFM1A2PYH4 AK3-203ENST00000447596 705 ntTSL 2 BASIC34.31■■■■□ 3.08
HFM1A2PYH4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC34.31■■■■□ 3.08
HFM1A2PYH4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HFM1A2PYH4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HFM1A2PYH4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HFM1A2PYH4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.3■■■■□ 3.08
HFM1A2PYH4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 AL356740.2-201ENST00000601559 647 ntBASIC34.3■■■■□ 3.08
HFM1A2PYH4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC34.3■■■■□ 3.08
HFM1A2PYH4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC34.3■■■■□ 3.08
HFM1A2PYH4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC34.3■■■■□ 3.08
HFM1A2PYH4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
HFM1A2PYH4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
HFM1A2PYH4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HFM1A2PYH4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC34.29■■■■□ 3.08
HFM1A2PYH4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HFM1A2PYH4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
HFM1A2PYH4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HFM1A2PYH4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HFM1A2PYH4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms