Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 AC131274.2-201ENST00000580697 1507 ntBASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.6■□□□□ 0.25
IGHV4-28A0A0C4DH34 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 MIR6722-201ENST00000617286 78 ntBASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 AL117332.1-201ENST00000622628 974 ntBASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 HLA-L-211ENST00000482052 1765 ntBASIC16.59■□□□□ 0.25
IGHV4-28A0A0C4DH34 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGHV4-28A0A0C4DH34 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGHV4-28A0A0C4DH34 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 AL022069.1-201ENST00000568025 1636 ntBASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC142381.3-201ENST00000568208 1670 ntBASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 AP003733.4-201ENST00000623785 1697 ntBASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV4-28A0A0C4DH34 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC020928.2-201ENST00000588717 2197 ntBASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC008406.3-201ENST00000620001 1374 ntBASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 AL356740.2-201ENST00000601559 647 ntBASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGHV4-28A0A0C4DH34 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGHV4-28A0A0C4DH34 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGHV4-28A0A0C4DH34 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.56■□□□□ 0.24
IGHV4-28A0A0C4DH34 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
IGHV4-28A0A0C4DH34 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 MIR3621-201ENST00000580529 85 ntBASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC138932.3-201ENST00000567634 1902 ntBASIC16.55■□□□□ 0.24
IGHV4-28A0A0C4DH34 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IGHV4-28A0A0C4DH34 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms