Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 LINC00526-201ENST00000581067 1875 ntBASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV9-2A0A087WT02 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-2A0A087WT02 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-2A0A087WT02 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
TRAV9-2A0A087WT02 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV9-2A0A087WT02 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-2A0A087WT02 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-2A0A087WT02 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV9-2A0A087WT02 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV9-2A0A087WT02 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV9-2A0A087WT02 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV9-2A0A087WT02 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 DUSP8P3-201ENST00000399571 1760 ntBASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 RNF126P1-201ENST00000567452 1320 ntBASIC16.95■□□□□ 0.3
TRAV9-2A0A087WT02 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 FOXO3B-201ENST00000395675 1928 ntBASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-2A0A087WT02 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAV9-2A0A087WT02 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms