Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 AL137783.1-201ENST00000623494 1896 ntBASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 AC127383.1-201ENST00000444697 1800 ntBASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 AC112504.1-201ENST00000623415 1841 ntBASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 KRT8P31-201ENST00000504812 1408 ntBASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AL138725.1-201ENST00000407347 1314 ntBASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AC002472.4-201ENST00000641915 272 ntBASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AC024909.3-201ENST00000611513 2257 ntBASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCH2Q9Y6C5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 ACTBP7-201ENST00000418351 1124 ntBASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 KRT17P4-201ENST00000429445 819 ntBASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 GCSHP3-201ENST00000431120 391 ntBASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 CICP12-201ENST00000455801 843 ntBASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 AC093909.3-201ENST00000504783 336 ntBASIC16.79■□□□□ 0.28
PTCH2Q9Y6C5 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms