Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 GGTLC5P-201ENST00000617623 998 ntBASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AL691432.1-201ENST00000596308 1422 ntBASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AC084364.1-201ENST00000551967 1556 ntBASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 AL445209.1-201ENST00000607269 3491 ntBASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRAPPC1Q9Y5R8 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AC007787.1-201ENST00000588095 1583 ntBASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AC091607.1-201ENST00000490318 1060 ntBASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms