Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 TPM3P8-201ENST00000330554 643 ntBASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 POM121L10P-201ENST00000436994 1285 ntBASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AL590640.2-201ENST00000457038 527 ntBASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AL354989.2-201ENST00000435838 1540 ntBASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 AL122018.1-201ENST00000446607 2310 ntBASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 MIR663B-201ENST00000408361 115 ntBASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 RN7SL190P-201ENST00000582519 257 ntBASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 PRSS30P-206ENST00000641773 873 ntBASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 AC007326.2-201ENST00000624224 7579 ntBASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PCDHGA9Q9Y5G4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms