Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 DUX4L50-201ENST00000455245 715 ntBASIC13.81□□□□□ -0.2
DKK4Q9UBT3 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 RN7SL23P-201ENST00000484055 275 ntBASIC13.81□□□□□ -0.2
DKK4Q9UBT3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 MIR2392-201ENST00000584881 84 ntBASIC13.81□□□□□ -0.2
DKK4Q9UBT3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.81□□□□□ -0.2
DKK4Q9UBT3 CYP2T1P-202ENST00000641596 2535 ntBASIC13.81□□□□□ -0.2
DKK4Q9UBT3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 RN7SL494P-201ENST00000461517 304 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AC027139.1-201ENST00000565286 951 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AC007250.1-201ENST00000608934 338 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AC024909.3-201ENST00000611513 2257 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AL137783.1-201ENST00000623494 1896 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
DKK4Q9UBT3 AC021305.1-201ENST00000520656 1514 ntBASIC13.8□□□□□ -0.2
DKK4Q9UBT3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms