Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 ACKR1-201ENST00000368121 1240 ntBASIC12.98□□□□□ -0.33
GCM1Q9NP62 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 NUS1P3-201ENST00000423502 862 ntBASIC12.98□□□□□ -0.33
GCM1Q9NP62 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 AC015936.2-201ENST00000593177 259 ntBASIC12.98□□□□□ -0.33
GCM1Q9NP62 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 RPSAP52-203ENST00000622976 1023 ntBASIC12.98□□□□□ -0.33
GCM1Q9NP62 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 AC138035.3-201ENST00000622706 2791 ntBASIC12.98□□□□□ -0.33
GCM1Q9NP62 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AC013268.4-201ENST00000637413 2228 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AL645937.2-201ENST00000396808 931 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 TDH-203ENST00000531764 1110 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 PTP4A1P2-201ENST00000546033 454 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 MIR5189-201ENST00000577370 114 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AP005019.2-201ENST00000615104 511 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms