Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL033527.4-201ENST00000641026 673 ntBASIC16.01■□□□□ 0.15
CD248Q9HCU0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.01■□□□□ 0.15
CD248Q9HCU0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD248Q9HCU0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16■□□□□ 0.15
CD248Q9HCU0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16■□□□□ 0.15
CD248Q9HCU0 AC136604.1-201ENST00000418535 575 ntBASIC16■□□□□ 0.15
CD248Q9HCU0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16■□□□□ 0.15
CD248Q9HCU0 AP005482.1-201ENST00000563722 1273 ntBASIC16■□□□□ 0.15
CD248Q9HCU0 MIR5189-201ENST00000577370 114 ntBASIC16■□□□□ 0.15
CD248Q9HCU0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD248Q9HCU0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16■□□□□ 0.15
CD248Q9HCU0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CD248Q9HCU0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16■□□□□ 0.15
CD248Q9HCU0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 Z82170.1-201ENST00000625081 3192 ntBASIC15.99■□□□□ 0.15
CD248Q9HCU0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 ACTG1P3-201ENST00000431775 1114 ntBASIC15.99■□□□□ 0.15
CD248Q9HCU0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 FAM86LP-201ENST00000478302 853 ntBASIC15.99■□□□□ 0.15
CD248Q9HCU0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 HNRNPUP1-201ENST00000554987 333 ntBASIC15.99■□□□□ 0.15
CD248Q9HCU0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 AC124283.3-201ENST00000570869 594 ntBASIC15.99■□□□□ 0.15
CD248Q9HCU0 AC233724.13-201ENST00000598383 410 ntBASIC15.99■□□□□ 0.15
CD248Q9HCU0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD248Q9HCU0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.99■□□□□ 0.15
CD248Q9HCU0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms