Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC023274.1-201ENST00000418278 595 ntBASIC18.64■□□□□ 0.57
UPF2Q9HAU5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 RN7SL828P-201ENST00000607615 303 ntBASIC18.64■□□□□ 0.57
UPF2Q9HAU5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 AL590627.1-203ENST00000421194 1026 ntBASIC18.63■□□□□ 0.57
UPF2Q9HAU5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 AC005237.2-201ENST00000434368 219 ntBASIC18.63■□□□□ 0.57
UPF2Q9HAU5 MTND6P24-201ENST00000440466 518 ntBASIC18.63■□□□□ 0.57
UPF2Q9HAU5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 KRT18P43-201ENST00000469825 1281 ntBASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF2Q9HAU5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 AC074338.1-201ENST00000416825 156 ntBASIC18.62■□□□□ 0.57
UPF2Q9HAU5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 TPM4P1-201ENST00000436100 807 ntBASIC18.62■□□□□ 0.57
UPF2Q9HAU5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.62■□□□□ 0.57
UPF2Q9HAU5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms