Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC012362.1-201ENST00000434906 739 ntBASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AP003171.2-201ENST00000528208 925 ntBASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC242376.2-201ENST00000619355 883 ntBASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC138466.4-201ENST00000623965 852 ntBASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2OQ9C0C9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
UBE2OQ9C0C9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBE2OQ9C0C9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
UBE2OQ9C0C9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AL139094.1-201ENST00000405549 1188 ntBASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2OQ9C0C9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 POM121L8P-201ENST00000417732 1281 ntBASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 AL139008.1-201ENST00000437894 228 ntBASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 POM121L9P-203ENST00000441984 1285 ntBASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms