Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 MIR557-201ENST00000385239 98 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AL583805.1-201ENST00000391389 531 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AL512430.1-201ENST00000392575 860 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AL592076.1-201ENST00000424448 303 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AC130709.1-201ENST00000484779 1212 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AP001065.2-201ENST00000617205 644 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AC126365.1-201ENST00000578585 1514 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 C18orf15-201ENST00000623680 2534 ntBASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH11YQ9BZA8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 TSPY25P-201ENST00000429463 745 ntBASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 AC114501.1-201ENST00000445949 172 ntBASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 HLA-C-210ENST00000640219 976 ntBASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 LTB4R2-202ENST00000528054 3092 ntBASIC19.28■□□□□ 0.68
PCDH11YQ9BZA8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 RNA5SP359-201ENST00000364838 113 ntBASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 AC079112.1-201ENST00000454972 939 ntBASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 AHCYP4-201ENST00000419201 1315 ntBASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH11YQ9BZA8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11YQ9BZA8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PCDH11YQ9BZA8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11YQ9BZA8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11YQ9BZA8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11YQ9BZA8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11YQ9BZA8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms