Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 AC041040.2-201ENST00000622926 2899 ntBASIC13.48□□□□□ -0.25
VRK1Q99986 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VRK1Q99986 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VRK1Q99986 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
VRK1Q99986 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 ELK1P1-201ENST00000485699 580 ntBASIC13.47□□□□□ -0.25
VRK1Q99986 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.47□□□□□ -0.25
VRK1Q99986 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.47□□□□□ -0.25
VRK1Q99986 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.47□□□□□ -0.25
VRK1Q99986 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.47□□□□□ -0.25
VRK1Q99986 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.47□□□□□ -0.25
VRK1Q99986 CTBP2P3-201ENST00000585629 1255 ntBASIC13.47□□□□□ -0.25
VRK1Q99986 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.47□□□□□ -0.25
VRK1Q99986 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK1Q99986 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK1Q99986 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VRK1Q99986 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
VRK1Q99986 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
VRK1Q99986 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
VRK1Q99986 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
VRK1Q99986 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms