Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 AC007969.1-201ENST00000433675 447 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PPY2P-201ENST00000582808 702 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 AC138696.2-201ENST00000607376 223 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 MIR6799-201ENST00000620297 69 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 AC015818.8-201ENST00000587907 1519 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 REXO1L6P-201ENST00000603433 1515 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 BTBD6P1-201ENST00000412176 1267 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 RPL13AP20-201ENST00000459725 609 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AP006547.1-201ENST00000563435 692 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 RN7SL219P-201ENST00000582872 296 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AC073413.1-201ENST00000603927 732 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AC244157.2-201ENST00000616239 1006 ntBASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK5RAP1Q96SZ6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 PCDHA3-202ENST00000532566 4594 ntBASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 TCAF2P1-201ENST00000291129 2421 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms