Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 RHOQP1-201ENST00000555758 579 ntBASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC85AQ96PX6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 AP000593.2-201ENST00000542775 1433 ntBASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 RN7SKP230-201ENST00000365642 335 ntBASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 CYP46A4P-201ENST00000414953 267 ntBASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC85AQ96PX6 AC091951.1-201ENST00000512854 2465 ntBASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 SPTLC1P5-201ENST00000450718 252 ntBASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 AC138696.2-201ENST00000607376 223 ntBASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 AL162727.3-201ENST00000635661 2787 ntBASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC85AQ96PX6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.66■□□□□ 0.58
CCDC85AQ96PX6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms