Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 C2orf27AP3-201ENST00000434123 579 ntBASIC20.93■□□□□ 0.94
CCDC7Q96M83 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 AL354718.3-201ENST00000616414 581 ntBASIC20.93■□□□□ 0.94
CCDC7Q96M83 CR382287.1-201ENST00000623954 586 ntBASIC20.93■□□□□ 0.94
CCDC7Q96M83 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 AC007191.1-201ENST00000623179 2995 ntBASIC20.93■□□□□ 0.94
CCDC7Q96M83 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC7Q96M83 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC7Q96M83 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 AL138725.1-201ENST00000407347 1314 ntBASIC20.92■□□□□ 0.94
CCDC7Q96M83 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.92■□□□□ 0.94
CCDC7Q96M83 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC7Q96M83 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC7Q96M83 CLUHP2-201ENST00000426660 1303 ntBASIC20.92■□□□□ 0.94
CCDC7Q96M83 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AP003171.2-201ENST00000528208 925 ntBASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AC025279.2-201ENST00000569730 653 ntBASIC20.91■□□□□ 0.94
CCDC7Q96M83 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC7Q96M83 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC7Q96M83 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms