Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 RN7SKP230-201ENST00000365642 335 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 RN7SKP175-201ENST00000408472 289 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.26■□□□□ 0.19
SNX27Q96L92 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 CHMP1AP1-201ENST00000445563 662 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 EIF4HP1-201ENST00000453115 687 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 AC008267.1-201ENST00000474858 1069 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.26■□□□□ 0.19
SNX27Q96L92 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.26■□□□□ 0.19
SNX27Q96L92 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 DGAT2L7P-201ENST00000602462 744 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 AL136301.1-201ENST00000615830 422 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 AP003419.4-201ENST00000616071 517 ntBASIC16.26■□□□□ 0.19
SNX27Q96L92 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SNX27Q96L92 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SNX27Q96L92 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
SNX27Q96L92 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 AC092384.3-202ENST00000564646 2873 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AL138725.1-201ENST00000407347 1314 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SNX27Q96L92 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 INE2-201ENST00000630399 1874 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
SNX27Q96L92 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AC079178.1-201ENST00000420915 656 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.25■□□□□ 0.19
SNX27Q96L92 HIST2H2BB-201ENST00000449108 381 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.25■□□□□ 0.19
SNX27Q96L92 AC091271.1-201ENST00000611877 1162 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 AC005695.3-201ENST00000614522 232 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SNX27Q96L92 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 ZBED1P1-201ENST00000502364 1930 ntBASIC16.25■□□□□ 0.19
SNX27Q96L92 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX27Q96L92 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNX27Q96L92 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SNX27Q96L92 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms