Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AC092364.2-202ENST00000597012 1073 ntBASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AC003102.2-201ENST00000589195 1469 ntBASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 DGCR5-201ENST00000399539 862 ntBASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 WASH4P-201ENST00000564273 1246 ntBASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 AGGF1P1-201ENST00000509500 2073 ntBASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 AC104581.4-201ENST00000623126 3052 ntBASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM5Q96HC4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 PCDHA3-202ENST00000532566 4594 ntBASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 AL138725.1-201ENST00000407347 1314 ntBASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 SALL4P5-201ENST00000419001 1760 ntBASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms