Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 AC106760.1-201ENST00000508690 800 ntBASIC13.63□□□□□ -0.23
CPNE4Q96A23 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 AC092933.1-201ENST00000393644 945 ntBASIC13.62□□□□□ -0.23
CPNE4Q96A23 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 HLA-K-203ENST00000430151 1046 ntBASIC13.62□□□□□ -0.23
CPNE4Q96A23 AC016694.1-201ENST00000434179 700 ntBASIC13.62□□□□□ -0.23
CPNE4Q96A23 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 AC145423.3-201ENST00000615987 467 ntBASIC13.62□□□□□ -0.23
CPNE4Q96A23 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CPNE4Q96A23 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE4Q96A23 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms