Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.08■□□□□ 0.16
SHC3Q92529 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.08■□□□□ 0.16
SHC3Q92529 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.08■□□□□ 0.16
SHC3Q92529 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.08■□□□□ 0.16
SHC3Q92529 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.08■□□□□ 0.16
SHC3Q92529 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 AC134312.5-201ENST00000568031 1313 ntBASIC16.08■□□□□ 0.16
SHC3Q92529 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SHC3Q92529 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SHC3Q92529 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SHC3Q92529 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SHC3Q92529 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 AL138709.1-201ENST00000614840 1693 ntBASIC16.08■□□□□ 0.16
SHC3Q92529 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.08■□□□□ 0.16
SHC3Q92529 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHC3Q92529 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.08■□□□□ 0.16
SHC3Q92529 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SHC3Q92529 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SHC3Q92529 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.07■□□□□ 0.16
SHC3Q92529 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 AC007969.1-201ENST00000433675 447 ntBASIC16.07■□□□□ 0.16
SHC3Q92529 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SHC3Q92529 FO681548.1-201ENST00000455617 1132 ntBASIC16.07■□□□□ 0.16
SHC3Q92529 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.07■□□□□ 0.16
SHC3Q92529 AC068587.3-201ENST00000526613 355 ntBASIC16.07■□□□□ 0.16
SHC3Q92529 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 PTP4A1P2-201ENST00000546033 454 ntBASIC16.07■□□□□ 0.16
SHC3Q92529 AC145423.3-201ENST00000615987 467 ntBASIC16.07■□□□□ 0.16
SHC3Q92529 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 AL138725.1-201ENST00000407347 1314 ntBASIC16.07■□□□□ 0.16
SHC3Q92529 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SHC3Q92529 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SHC3Q92529 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHC3Q92529 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHC3Q92529 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SHC3Q92529 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
SHC3Q92529 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 SALL4P5-201ENST00000419001 1760 ntBASIC16.06■□□□□ 0.16
SHC3Q92529 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
SHC3Q92529 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHC3Q92529 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.06■□□□□ 0.16
SHC3Q92529 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 AC015802.1-201ENST00000588104 1449 ntBASIC16.06■□□□□ 0.16
SHC3Q92529 POM121L8P-201ENST00000417732 1281 ntBASIC16.06■□□□□ 0.16
SHC3Q92529 POM121L9P-203ENST00000441984 1285 ntBASIC16.06■□□□□ 0.16
SHC3Q92529 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.06■□□□□ 0.16
SHC3Q92529 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 TDH-203ENST00000531764 1110 ntBASIC16.06■□□□□ 0.16
SHC3Q92529 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.06■□□□□ 0.16
SHC3Q92529 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.06■□□□□ 0.16
SHC3Q92529 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.06■□□□□ 0.16
SHC3Q92529 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.06■□□□□ 0.16
SHC3Q92529 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.06■□□□□ 0.16
SHC3Q92529 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHC3Q92529 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SHC3Q92529 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms