Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 AL078644.1-201ENST00000609881 752 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 AC073439.1-201ENST00000624121 1774 ntBASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 VENTXP1-201ENST00000569334 2716 ntBASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 IGHV3-65-201ENST00000523210 341 ntBASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 AC107375.1-201ENST00000564464 2231 ntBASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.76□□□□□ -0.21
CROCCP3Q8IVE0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 AC004987.2-201ENST00000395959 1148 ntBASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ACTL9-202ENST00000612068 1252 ntBASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 AC107918.4-202ENST00000641623 219 ntBASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms