Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC092364.2-202ENST00000597012 1073 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AL138828.2-201ENST00000615812 383 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AL390754.1-201ENST00000619088 582 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 AL590560.3-201ENST00000623350 461 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC015802.1-201ENST00000588104 1449 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AC018529.2-202ENST00000611482 3087 ntBASIC13.54□□□□□ -0.24
LRRC28Q86X40 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.54□□□□□ -0.24
LRRC28Q86X40 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 SPDYE12P-201ENST00000618416 771 ntBASIC13.54□□□□□ -0.24
LRRC28Q86X40 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AJ011932.1-201ENST00000621707 465 ntBASIC13.54□□□□□ -0.24
LRRC28Q86X40 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AC100757.3-201ENST00000622361 1406 ntBASIC13.54□□□□□ -0.24
LRRC28Q86X40 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRC28Q86X40 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRC28Q86X40 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CICP11-201ENST00000434745 2827 ntBASIC13.53□□□□□ -0.24
LRRC28Q86X40 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 RPL37AP1-201ENST00000412502 279 ntBASIC13.53□□□□□ -0.24
LRRC28Q86X40 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.53□□□□□ -0.24
LRRC28Q86X40 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms