Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MRPL37P1-201ENST00000592451 1337 ntBASIC17.92■□□□□ 0.46
PDS5AQ29RF7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 AC013268.4-201ENST00000637413 2228 ntBASIC17.92■□□□□ 0.46
PDS5AQ29RF7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 AL160314.3-201ENST00000556041 767 ntBASIC17.91■□□□□ 0.46
PDS5AQ29RF7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PDS5AQ29RF7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 CROCCP1-201ENST00000426910 5675 ntBASIC17.9■□□□□ 0.46
PDS5AQ29RF7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 CYP46A4P-201ENST00000414953 267 ntBASIC17.9■□□□□ 0.46
PDS5AQ29RF7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 AC106872.11-201ENST00000605838 421 ntBASIC17.9■□□□□ 0.46
PDS5AQ29RF7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.9■□□□□ 0.46
PDS5AQ29RF7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.89■□□□□ 0.46
PDS5AQ29RF7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PDS5AQ29RF7 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.89■□□□□ 0.46
PDS5AQ29RF7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PDS5AQ29RF7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.46
PDS5AQ29RF7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.89■□□□□ 0.46
PDS5AQ29RF7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 MBLAC2-202ENST00000514906 1936 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AC092135.3-201ENST00000624151 1846 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms